LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g00902	ATGCTTTCTTGGAAAGTTGTCCTGGTCTCGGCCGCCGTCATGTTCGCGGCGTTGGGAGTCGGAGTTTCTCTTCCAATCGCCGCCACTCACCTCCCTATTCTCTGGAGTTTCTTTCTCTTGTGTTTCAAGCCTCCTTACCTCTTCGTTGTTCTCAACGCCATCATCATCACTATCGTCGCATCTTCCTGGTTTCACCACTCAAACCACCAACCTCCGGAGCCAACTCCTCCACATGTTGAATCCCTGCCCATTGCAGAACCGCCGCTTCTCCAAGAAGAAGAAGAGGAGGAGAAGAAAGTGATCGAAGAAGAAGAAGAAGAGGAGAAGAAAGTAATAGAAGAAGGAATGGCACTGACCGAGATTGTATCGCCGGCGGAGAAGCCTCTGGTTTCTGCTAGGTTCACTAACCGGAAATTCCTTAAATCCAGTTCCGAAGGTGGGAGAGCGTTGAGGGTGGTGGCTAAGGCGAAACGGCAGGAGACGTTGGAGAGCACGTGGAAGGCCATAACGGAGGGTCGATCCATCCCATTGAGCAGACACATGAAGAAGTCTGACACGTGGCACAACCGCGGCAATCTGGCCCCACCTCCGGAAACCACCTTCAACGATGTGTCGGCCGGAAGGCTGCGGAAAGAACCCTCGCTGAGTCAAGACGACTTGAATAGGCGCGTCGAAGCGTTCATACGAAAGTTCAACCAAGACATGAGGCTTCAAAGACAACAATCCTTAGAACAATACATGCAGCAGATGATTAACCGCGGTGCCGCTTAA	771	0.5188	MLSWKVVLVSAAVMFAALGVGVSLPIAATHLPILWSFFLLCFKPPYLFVVLNAIIITIVASSWFHHSNHQPPEPTPPHVESLPIAEPPLLQEEEEEEKKVIEEEEEEEKKVIEEGMALTEIVSPAEKPLVSARFTNRKFLKSSSEGGRALRVVAKAKRQETLESTWKAITEGRSIPLSRHMKKSDTWHNRGNLAPPPETTFNDVSAGRLRKEPSLSQDDLNRRVEAFIRKFNQDMRLQRQQSLEQYMQQMINRGAA	256

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo2g00902	256	Pfam	Cotton fibre expressed protein	217	253	IPR008480	-
	Pumo2g00902	256	MobiDBLite	consensus disorder prediction	186	216	-	-
	Pumo2g00902	256	MobiDBLite	consensus disorder prediction	67	108	-	-
	Pumo2g00902	256	Pfam	Domain of unknown function (DUF4408)	32	62	IPR025520	-
	Pumo2g00902	256	Coils	Coil	90	114	-	-
	Pumo2g00902	256	PANTHER	COTTON FIBER (DUF761)	27	254	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g00902	Pumo-Chr2	13673760	13675119	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g00902	-		-	gmx:100794998	368.237

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo2g00902	2	13673760	13675119	Pumo2g00902	2	13673760	13675119	ECH