Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00835 ATGGATGCTCACATGACTGATTTGGATTGGGAGACTTCAAGTGACAGCAGCAGCAGTGAGGATCAAGAGGATATTGATTTTCAATATGGTGGACAAGCTCGAAGCATATTATCAAGTTTAGAGGAAAGCATTGGGAGGATTGATGATTTTCTCTCATTTGAGAGGGCATTCGTCCATGGGGATGTGGTCTGCACCTCCTCAGACCCATCCGGACAGACGGGGAGGGTCACAAGTGTTGATGTATTAGTGGACTTGGAAAATGTTCAAGGAAAGAAATTAAAAAATGTGAACTCCAAGAAACTTATGAAGATTCGCTCCATTTCAGAAGGTGATTGTGTAATTAAGGGGCCATGGATTGGCCGGGTTCAGAGGGTGGTAGACAGAGTGACTATATTGTTTGATGATGGAACTAAATGTGAGGTCATTACCTTGGAAAAAGATAAGCTTTTACCACTGACTCATAATTTTCTTGAAGATTCACAGTATCCATATTATCCAGGGCAGAGAGTAAAGGTTAAGACCTCCACTGCTTCTAAACCAGCTAGATGGCTGTGTGGCACCTGGAAAGACAATCATGATGAAGGAACTGTTTGTGCTGTGGAAGCAGGTTTGGTGTATGTTAATTGGCTTGCCTCTGTTCTTTTGGGTTCCAATTTTAATGTGAGTGTTCCTCCACGCTGGCAAGATTCCAAAAACTTGACCTTGTTGTCCTGTTTTTCACATACAAACTGGCAACTTGGTGACTGGTGCATGCTCCCAGTTGCGGACCAAAAGGAACAAATGATTCAAGATGCATCTACTTGTGATCCTTATAATGAGCATGGTATGGCTAGAGGATATAAGAGAAGAAATCTTAACATTGGGGAATTATTTCTAATTGAGAAGATAAAGACAAAAGTTGATATTGTTTGGCAAAATGGTGAACATACTTTGGGATTAGATCCACACAACTTAGTCCCAGTGAATGTCATAAACACTCATGAATTTTGGCCCCAGCAGTTTGTACTGGAAAAAGGTGCTTCCGATGATCTTCTTAAGCCTAGCAATCAAAGATGGGGTGTTGTTCTTTCCATGGATGCAAAAGAGCATACTGTGAAGGTACACTGGAGAACTGTTCCCACATCTGAGACAGATAATTTGGCTGGAGACACAATGATTGAAACTGTGAGTGCCTACGAACTTGTCGAGCACCCAGATTATTCCTGTTGTTTTGGTGATATTGTGTTCAAGGCGGCTCAAAAACAGCTTAGCTACCAAGCTGATAAAGATAATGCGAAGTCAATGAGTGACTTGAATGTGGAAGTTCCTCTGATAAACTGGGACCAAATCAGTTATCCGAACAAGTCTGTAGATAACAGTTACCTCTCCTGTATTGGCAATGTTACTGGTTTCAAAGATGGTGACGTGGAGGTGCAATGGGCTACTGGTTTAACAACCAAGGTTGCACCTTATGAAATTTTTCGAATTGATAAGCATGAAGGTTCAACTGCAACCCCTGTTCCTTATGAAGCAAATGTTGAGGAGTTGTCTCAAGAGATGATTGATCATGGAAGTCTACCTTCAGACCAGAAGGGAAAGGACTTGTTAGACTGTAATGGCAATGGAGATAATTGTGAAAAGCATCCAGGAGAGAGTAGTTCCTCTACCCTTCCTCAAGCTGCCTTTGAACTTTTCTCCAGTATTAAGGCCAGCATATTCAAAACACTTGGCGTAACATCACTTCCTGGAAAATTCTCCCCAGTCCCTACGTTTGAAGAGGGAAATGAATCTAATTGTCTTGATAAGAAAGATTTGGACACTTGTGGCCCTGACACTGAATCACATCCAGTGAGCAGGTTGCAGTCTTCTGAAGACATGACTCCATATTGTGAAGTTATTAGGACTCACGAGAGAAATGATTTTCCAGTTTCCTTAGACAACAACAGTTCAGATCAGTTGAAGCAGTTTGATGTAATTGATAATTGCTCAGACCACCACTTTTTTGATGAGGGGAAAGGATTGTCATTATCTCAGGTTAAAAAAGGTTGGGTGAAGAAGGTACAACAAGAATGGAGCATTCTGGAGAGAAATCTTCCTGAAACTATTTATGTCCGAGTTTTTGAAGAAAGAATGGATCTCATGCGAGCAGCCATTGTCGGTGCATCTGGGACACCTTATCATGATGGATTGTTCTTCTTTGATATACGTTTCCCTCCAGAGTATCCCAGCGAACCCCCTATGGTGCATTACAATTCTGGCGGGCTACGATTAAATCCTAACCTGTATGAGTCAGGGAAAGTCTGTCTGAGTCTCCTAAACACATGGACTGGTACAGACACCGAAGTGTGGAACCCTGGAGCTTCCACAATTCTTCAAGTCCTTCTTTCTCTTCAGGCCCTTGTCCTTAATGAGAAGCCTTATTTCAATGAGGCTGGATATGATCAACAAATTGGCAGAGCTGAAGGGGAGAGAAACTCAGTGAGTTACAATGAGAATGCTTTCCTTGTCACCTGCAAATCCATTTTGTATCTATTAAGAAAGCCTCCCAAGCATTTTGAGGCATTGTTGGAAGAGCACTTCAGACAGCGCTCCAAACATATACTTATGGCTTGTAAGGCATATCTTGAAGGAGCTCCCATTGGATGTGCTTTTGGTGTTGGAAAAACTGAGCATGAAAACCAGAAGGGAACTTCTACTGGATTTAAAATCATGCTTGCTAAGCTCTTCCCCAAGCTAGTAGAGGCATTTTCTGACAAGGGAATTGATTGCAGCCAGTTTGCTGAGATGCAAAAGTAA 2775 0.4198 MDAHMTDLDWETSSDSSSSEDQEDIDFQYGGQARSILSSLEESIGRIDDFLSFERAFVHGDVVCTSSDPSGQTGRVTSVDVLVDLENVQGKKLKNVNSKKLMKIRSISEGDCVIKGPWIGRVQRVVDRVTILFDDGTKCEVITLEKDKLLPLTHNFLEDSQYPYYPGQRVKVKTSTASKPARWLCGTWKDNHDEGTVCAVEAGLVYVNWLASVLLGSNFNVSVPPRWQDSKNLTLLSCFSHTNWQLGDWCMLPVADQKEQMIQDASTCDPYNEHGMARGYKRRNLNIGELFLIEKIKTKVDIVWQNGEHTLGLDPHNLVPVNVINTHEFWPQQFVLEKGASDDLLKPSNQRWGVVLSMDAKEHTVKVHWRTVPTSETDNLAGDTMIETVSAYELVEHPDYSCCFGDIVFKAAQKQLSYQADKDNAKSMSDLNVEVPLINWDQISYPNKSVDNSYLSCIGNVTGFKDGDVEVQWATGLTTKVAPYEIFRIDKHEGSTATPVPYEANVEELSQEMIDHGSLPSDQKGKDLLDCNGNGDNCEKHPGESSSSTLPQAAFELFSSIKASIFKTLGVTSLPGKFSPVPTFEEGNESNCLDKKDLDTCGPDTESHPVSRLQSSEDMTPYCEVIRTHERNDFPVSLDNNSSDQLKQFDVIDNCSDHHFFDEGKGLSLSQVKKGWVKKVQQEWSILERNLPETIYVRVFEERMDLMRAAIVGASGTPYHDGLFFFDIRFPPEYPSEPPMVHYNSGGLRLNPNLYESGKVCLSLLNTWTGTDTEVWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGERNSVSYNENAFLVTCKSILYLLRKPPKHFEALLEEHFRQRSKHILMACKAYLEGAPIGCAFGVGKTEHENQKGTSTGFKIMLAKLFPKLVEAFSDKGIDCSQFAEMQK 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00835 924 Gene3D Ubiquitin Conjugating Enzyme 637 916 IPR016135 -
Pumo2g00835 924 Pfam Ubiquitin-conjugating enzyme 680 826 IPR000608 -
Pumo2g00835 924 SUPERFAMILY UBC-like 668 844 IPR016135 -
Pumo2g00835 924 MobiDBLite consensus disorder prediction 516 547 - -
Pumo2g00835 924 CDD UBCc 677 830 IPR000608 -
Pumo2g00835 924 MobiDBLite consensus disorder prediction 1 23 - -
Pumo2g00835 924 SMART ubc_7 678 835 - -
Pumo2g00835 924 FunFam Probable ubiquitin-conjugating enzyme E2 23 637 913 - -
Pumo2g00835 924 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 4 916 - -
Pumo2g00835 924 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 675 835 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00835 Pumo-Chr2 12819396 12823821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00835 21 918 Miscellaneous Gene Families AT2G33770 49.396 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00835 K10581 - gmx:100805463 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00835 2 12819396 12823821 Pumo2g00835 2 12819396 12823821 ECH