Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00651 ATGGAGGGCAAAATCTTGGATTCTCAGAATCAGGTGCAAGTTGTGGAAAATTTATCTGCAAGGGTCTCTAATTTCTCCCTTGGTGACCAGATATCCCATTCCGATTCTCCTCTGGATTGTGAGGTGGATGGTAGGAGGAGGGATTGTGTTACTAAAGAGTATCGTGATTCTTTTTCCACTGATAGCACTGAAAGGCATTGTATAAATTCTTCTAGATTATATCCTGAATTACCTGACAAACAATTGGAAAAGCATAACGAGGACATGGAGTCTTCAGCTAATCTTCAGAAGCGGGGAAGGTACTTCTATTACGATACTCCACTGCATGAAGATACTGGAGTTTGGATACCAGTTTCAGTTCCACCTATGTTGGAAGATGATCACAAAGAGTGGACCAAAGGTTTTCACTCTAATGGTGGCTATTTTCCTGATGATGACATGGGATGGAATCAATATGTTGGAGATGAAAGGGAATTGACTATGTGGGATGTGCTAGCAGAAATGTTACTTGTAGCTCGAGGAAAAGTGACTTCTTTGGCATCAGGAGATATTCATACATGTAGTTTTTCATGGATATCCAGCCATGTGCTTGAACAAGCTTGGAGAGAAATGGCACAAACTCTTACAGAGGCCAACTTTGGTAATGTAAAGGAACTACTGGAAGCAGAGCCTCCAAAATGGTTAGCAGATAGTGCTGCTGCTTCTTGTATGCTTTGTGGTGTGAGATTTCATCCCATCATGTGCTCCCGGCATCACTGCCGGTTTTGTGGAGGAATATTTTGTGGTGAATGTTCCAAAGGGCGGAGCTTGTTGCCATCAAAATTCCGAGTTTCTGACCCCCAAAGAGTATGTGATGTATGCTGTGTCCGACTTGAGTCTGTACAACCTTATTTGATGGATCATGTAAGCAATGCTGCTCAGTTGCCAACCCATGACCTGACAGATCTGAGCACTTTGAGATCGTGGGTTAATTTTCCTTGGGGGCAGTCCATGGAATATGAAATTTACAAGGCAACTAACACAATCAAAGCTTATAATCAGGTAGGTTTTTTAAAGCCCGAGAAGTCAATTCCAGATGTCATTCTAAGACAAGCAAAAGGCCTTGCAATTATCACTGTGGTCAAAGTAGGAGTGGTGGTTACTTACAATATTGGAACAGGACTTGTGGTTGCACGTAGGGAAGATGGTTCATGGTCTCCTCCATCTGCTGTTTCCACCTTTGGTGTAGGGTGGGGAGCTCAGGCTGGAGGCGAGTTGACAGACTTCATTATTGTTTTGAGAACAAATGATGCTGTCAAGACATTTAGTGGCAATATGCATCTTTCACTTGGAGCTGGTTTGAGTGCTGCAGTAGGCATTGTTGGTAGGTCAGTTGAAGCTGATGTTCGAGCTGGTGATGGTGGCTATGCTGCTTGTTATAGCTACAGCTGCAGTAAAGGTGCATTTGTTGGATGTTCACTTGAAGGAAGTATGGTGAGTACTCGCATGCAAGAAAATTCCCGTTTCTATGGCAGCCAGTCTATAACTGCAACAGATATACTTCTTGGCTCCTTGCCTAGGCCACCTGCTGCTGCCATTCTCTACCGCGCACTTGCTGATTTGTATTCCAAGTTTGATGATTAA 1623 0.4344 MEGKILDSQNQVQVVENLSARVSNFSLGDQISHSDSPLDCEVDGRRRDCVTKEYRDSFSTDSTERHCINSSRLYPELPDKQLEKHNEDMESSANLQKRGRYFYYDTPLHEDTGVWIPVSVPPMLEDDHKEWTKGFHSNGGYFPDDDMGWNQYVGDERELTMWDVLAEMLLVARGKVTSLASGDIHTCSFSWISSHVLEQAWREMAQTLTEANFGNVKELLEAEPPKWLADSAAASCMLCGVRFHPIMCSRHHCRFCGGIFCGECSKGRSLLPSKFRVSDPQRVCDVCCVRLESVQPYLMDHVSNAAQLPTHDLTDLSTLRSWVNFPWGQSMEYEIYKATNTIKAYNQVGFLKPEKSIPDVILRQAKGLAIITVVKVGVVVTYNIGTGLVVARREDGSWSPPSAVSTFGVGWGAQAGGELTDFIIVLRTNDAVKTFSGNMHLSLGAGLSAAVGIVGRSVEADVRAGDGGYAACYSYSCSKGAFVGCSLEGSMVSTRMQENSRFYGSQSITATDILLGSLPRPPAAAILYRALADLYSKFDD 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00651 540 SUPERFAMILY FYVE/PHD zinc finger 225 304 IPR011011 -
Pumo2g00651 540 SMART fyve_4 222 293 IPR000306 GO:0046872
Pumo2g00651 540 CDD SYLF_FYVE 333 534 - -
Pumo2g00651 540 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 302 IPR013083 -
Pumo2g00651 540 Pfam FYVE zinc finger 226 291 IPR000306 GO:0046872
Pumo2g00651 540 Pfam Las17-binding protein actin regulator 408 532 IPR007461 -
Pumo2g00651 540 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 230 292 IPR017455 -
Pumo2g00651 540 FunFam Zinc finger family protein 216 298 - -
Pumo2g00651 540 PANTHER SH3YL1 PROTEIN 191 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00651 Pumo-Chr2 10195064 10198566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00651 227 310 EF-hand Containing Proteins AT3G14270 34.831 1.53e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00651 K20523 - gmx:100813648 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00651 2 10195064 10198566 Pumo2g00651 2 10195064 10198566 ECH