LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g00644	ATGGACCCGCCATGTTCGATCGATCAAGACGACGACGTTTTCGTCGACGCGATCCACCAATGCCCCGCCGAGGGCTCGCCGGAACCTTCTGAATCCGCTTCCACGCTTTCGGACCCTCCACCCGAACCCAAACCACACTCTCCGGCGATCACAATCCGGCGCCGGCCAGTCCGTCGCGGTATTCCACCTAATCAATCGTCAGTTTCGAGCTTCCAGAGCGATTTGACCGATGGAAATTCCAGAAGGAGCTTCCGACACCAACCGAGGCATAAAAATCTCAAGAAAGACGAGAATTCGGAGGAGAAACCCGATTCGGAGGAACCGCAACAAGTTAATGCCTCGCCGGAAGAGAACAACGAGGGCTCCACCGTAACTTCAGCTGCGAACGATGATGGAGCCGGCGATTCCGTTGACTCGGCGCCGCGACTCGGTGACTCGTCTTCGAGTTTGCTCGAACTCGCCGCGGGGATGGTGATTAACTTATTAGGGTTTCAGATGAAGTTAATGTTCATGTTCATAACTTGCCCGTTGCTGTTCATGTTTTATTCGTGCATGTTTTTCATGGATCCTTTGGGGACAACGAGGAAGGGCAAGGATTTCGTGATAGGGATTGTGAACAGAGTGTGGTGTTTTGTGTTTTCGTGCATTAGGCCTTATGTTAATAGATGGGTGAAGGAGGACGATTCGATTTGGAGCGTGGCGTTTCGGTGGGGGTGGGGGTTCTTGTGGTCGATGTATGTTTGTTGCGTTTTGTTTGGTTTGCTGGTTTCGTCGTTTGTGTTTAGTGGGTTTGTGATGAAGTTTTTGGTGGAGAAGCCGATTCAGATGAGGGAAGTTTTGAACTTTGATTATACCAAGCTTAGTCCTGTGGCTTACGTGCCTGTAATGTCGTGTGCTGGTGTTATTGGTGGGAGAGGTTCTGAGAATAAGGTTGATGCAACGAAGTGGGTGGGCGAACGGGTTATACCGTCTAAGCACAAGGTGCAAGTCACTGTTGAGTTAAGAGTGCCTGAGTCAGGATATAACAGAAACCTTGGGATCTTTCAGACCAGGGTAGATTTCCTATTGTCTAATGGTAAAGCTATTGCAAGCTCAAGTCAACCTTGCATGTTAAGATTCAGAAGTGAGCCTATCCGCCTAATCACGACTTTCCTCAAGATTGCTCCTCTTCTTACTGGCTATATATCCGAGACACAGACTCTGAGTGTGAAGATGAGAGGTTTCGTAGAAGGAGATTTACCTACTTCTTGCTTGAAAGTGACCCTTGAGCAACGAGCAGAATATCAACCAGGTGCAGGCATTCCTGAAATATATGATGCATCTCTGATTATTGAATCCGAACTTCCCTTATTCAAGAGGATTATTTGGCTTTGGAAGATGAGCATATTTATATGGATCGCCATGATGGCATTCTTCACGGAGTTACTTTTTGCTCTTGTGTGTTGCACTCCCATAATAATTCCTAAAACAAGGCAAAGGGTGGCTTCTGCTCGCGGTCCTGCAACCTTAAACCGTCTTCAGTCTCGAAATTGA	1533	0.4788	MDPPCSIDQDDDVFVDAIHQCPAEGSPEPSESASTLSDPPPEPKPHSPAITIRRRPVRRGIPPNQSSVSSFQSDLTDGNSRRSFRHQPRHKNLKKDENSEEKPDSEEPQQVNASPEENNEGSTVTSAANDDGAGDSVDSAPRLGDSSSSLLELAAGMVINLLGFQMKLMFMFITCPLLFMFYSCMFFMDPLGTTRKGKDFVIGIVNRVWCFVFSCIRPYVNRWVKEDDSIWSVAFRWGWGFLWSMYVCCVLFGLLVSSFVFSGFVMKFLVEKPIQMREVLNFDYTKLSPVAYVPVMSCAGVIGGRGSENKVDATKWVGERVIPSKHKVQVTVELRVPESGYNRNLGIFQTRVDFLLSNGKAIASSSQPCMLRFRSEPIRLITTFLKIAPLLTGYISETQTLSVKMRGFVEGDLPTSCLKVTLEQRAEYQPGAGIPEIYDASLIIESELPLFKRIIWLWKMSIFIWIAMMAFFTELLFALVCCTPIIIPKTRQRVASARGPATLNRLQSRN	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo2g00644	510	MobiDBLite	consensus disorder prediction	108	132	-	-
	Pumo2g00644	510	MobiDBLite	consensus disorder prediction	62	78	-	-
	Pumo2g00644	510	PANTHER	BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN	147	505	IPR009617	GO:0019915
	Pumo2g00644	510	MobiDBLite	consensus disorder prediction	90	107	-	-
	Pumo2g00644	510	Pfam	Putative adipose-regulatory protein (Seipin)	254	470	IPR009617	GO:0019915
	Pumo2g00644	510	MobiDBLite	consensus disorder prediction	19	141	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g00644	Pumo-Chr2	10138360	10141016	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g00644	K19365		-	gmx:100796452	895.575

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo2g00644	2	10138360	10141016	Pumo2g00644	2	10138360	10141016	ECH