Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00278 ATGAAGGGTCTCTTCAAGTCCAAGCCTCGCACTCCTGCGGATACAGTGCGCCAGACCAGAGATCTTCTGCTCTTCGTTGATCGCAGCCCCGAAACCCGCGAAAGCAAACGTGAAGAGAAGCAGATGTCCGAGCTATATAAAAATATCAGGGAGCTAAAGTCAATCCTGTATGGAAATAGTGAATCCGAACCAGTCTCCGAAGCTTGTGCGCAGTTGACTCAGGAGTTCTTTAAGGAGGACACGTTGCGACTGGTTATCAAATGTCTTCCAAAATTGAATTTGGAGGCCAGAAAAGATGCCACTCAAGTTGTTGCAAATTTACAAAGGCAACAGGTTCAGTTTAAGTTGATTGCATCTGATTACCTGGAGAAAAATCTGGATCTTATGGATGTTTTGATAGTTGGCTATGAAAACACAGATATGGCTTTACACTATGGTGCAATGCTGAGGGAGTGCATAAGACACCAGATTGTTGCAAAATATGTTCTGAACTCACCTCGTATGAAGAAGTTTTTTGACTATATCCAACTTCCAAATTTTGACATTGCTGCGGATGCTGCCGCAACCTTTAAGGAGCTCTTGACAAGACATAAATCTACTGTAGCTGAATTCCTTTCCAAGAATTATGAATGGTTTTTTGCAGAATACAACACTAAGCTGTTGGAATCTTCCAATTATATTACAAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATATTACTTGATCGTTCAAATTCAGCAGTAATGACACGATATGTGAGCTCAAGAGACAACTTGAGGATTTTAATGAATCTTCTAAGAGAGTCAAGCAAGAGCATACAGATTGAAGCATTTCATGTTTTCAAGCTATTTGCTGCTAACCAACATAAGCCAGCTGATATCGTCAGTATATTTGTTGCGAACAAAAGTAAGATGCTGAGACTATTGGAAGACTTCAAAATTGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTGATGAAGGAAATCGAAGCTCTTTAA 1008 0.4038 MKGLFKSKPRTPADTVRQTRDLLLFVDRSPETRESKREEKQMSELYKNIRELKSILYGNSESEPVSEACAQLTQEFFKEDTLRLVIKCLPKLNLEARKDATQVVANLQRQQVQFKLIASDYLEKNLDLMDVLIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPRMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYEWFFAEYNTKLLESSNYITRRQAVKLLGDILLDRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQHKPADIVSIFVANKSKMLRLLEDFKIDKEDEQFEADKAQVMKEIEAL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00278 335 Pfam Mo25-like 4 335 IPR013878 -
Pumo2g00278 335 Gene3D - 3 335 IPR011989 -
Pumo2g00278 335 SUPERFAMILY ARM repeat 10 335 IPR016024 -
Pumo2g00278 335 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 334 IPR013878 -
Pumo2g00278 335 Coils Coil 35 55 - -
Pumo2g00278 335 FunFam putative MO25-like protein At5g47540 3 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00278 Pumo-Chr2 5297642 5302297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00278 K08272 - gmx:100817060 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00278 2 5297642 5302297 Pumo2g00278 2 5297642 5302297 ECH
Pumo4g00117 4 1540240 1543766 Pumo2g00278 2 5297642 5302297 PCT