Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00220 ATGGCTGCCACCTCCAGCACCCATTGGTTCCAAACCAGAATGTTCTCTCCACCTACGACAACTCCACCACTCACTTCTCCATTTTCCACGTTCCTTTGGCCACACCAGAGGCTCCTCTCAAAAGGGTGCAGACGTTCCATGTTTATGAATGCAAAACCTCTTCTCAAAGATGGCACTCTCAGTGTTAATGGCAAGGATGCATTAAAGGGTGTGCCTGAGAATGTGGTGGTCACGCCATTCACTGGTTCATCGGCTTTCATAGGGGCCTCTTGTGCTGATGCTGCTAGTTCAAGCTTGGAGTCATTCATTCTAGATGGCGAATTTAGAAGCAGCTTGCAAGGAAATTCATCTAATGAACTTGAGCTTTGTGTGGAAAGTGGAGACCCAGCAGTAGTTACATCCCAGTCACTAAATGCTGTTTTCATGAATTATGGAGACCATCCATTTGATCTAGTGAAGGAATCTATGAAGGTTTTGTCAGAGCACACTGGTACCTTTTCACTGAGGGAAACCAAACAGATGCCAGGAATGTTAGATTGCTTTGGTTGGTGCACTTGGGAAGCTTTTTATCACAGTGTTAATCCTCAGGGAATCAAGGATGGACTCAGGAGTTTATCTGAAGGAGGCACACCAGCAAAATTCTTGATAATAGATGATGGATGGCAAGACACTGTGAATGAGTTTCAAAAAGATGGGGAGCCATTTATTGAAGGATCACAATTAATCAGCATCAAAGAAAACAATAAATTCCGAGCAGCGGGAGATGTAACTAAAAATGGAGCACCTCATGGTCTAAAGGATTTTGTTTCAGAAATCAAGAACACTTTTGGTCTCAAGTATGTCTATGTATGGCATGCCCTACTGGGTTACTGGGGAGGGTTAGATCCAAATGCATCTGGAACCAAGAAGTATGATCCAAAACTTAGATATCCAGTACAGTCACCAGGGAATTTAGCAAATACAAGGGATTTATCTATTGATGCCATGGAGAAGTACGGTATTGGTGTCATTGATCCAGCTAAAATTTCAGAGTTTTATGATGATATACACAGTTATCTTATCTCTCAAAACATTGATGGAGTTAAGATTGATGTTCAGAACATACTGGAAACAATTTCAAGTGGTCTAGGAGGTCGTGTTTTTCTCACTAGACACTTCCAACAGGCGCTTGAAAAGTCCATATCAACCAACTTTCAGGACAATAGCATAATCTGCTGCATGGGTCATAACACAGACTCCATTTACCACTCAAAACAAAGTGCAATCACACGAGCATCTGATGATTATTATCCGAAAAACCCCACAACTCAATCTCTACATATAGCTGCTGTAGCTTTCAACAGCATATTCCTTGGTGAAATTGTTATACCGGACTGGGACATGTTCTATAGTCTCCATGATGCAGCAGAGTTTCATGCAGTAGCTAGAGCAGTTGGAGGCTGTGGAGTATATGTAAGTGACAAACCTGGCCAGCATGATTTCAATGTACTGAAAAAGCTTGTACTTCCTGATGGATCAGTGCTCAGAGCCAGATATCCTGGGAGACCATCACGTGATTGTTTATTTATTGATCAAGTTATGGATAAGAAGAGCCTTCTCAAGATTTGGAACTTGAACAAATGTGGGGGAGTCATAGGCATCTTTAATTGCCAAGGAGCAGGTTCCTGGCCTGGTCTTGAAAGTAATGCTGAAGAAGACATCATTCCTGAGCTTTCATGCAAGGTCTCTCCCTCAGACATTGAGTATTTTGAAGAGGTTTCAGCAGGTCCATGGACTCAAGATTGTGCAGTTTTTCGCTTCAATACAGGCTCTCTGATGCGACTATCAAAGGAAGAATCATTTGATATTACATTAAAAGTATTGCAGTGTGAAGTGTTCACTGTATCTCCAATAAAGGTTTACAATCAAACAATCCAGTTTGCACCAATAGGACTAACAAATATGTATAACTCTGGTGGAACTGTTGAAGCAGTTGACTCAAGTGATTCTTCTGGATGTAAAATACACATAAGAGGTAGAGGAGGAGGTGACTTTGGAGCTTACTCCAACTTAAAACCAAAGTCTTGTTCTGTAAATTCAGAAGATTTGGAGTTCCAATTTAGAGAGGGAGATAATTTTTTTGGAGTAACAATTCCAGCTAAAACCAGTTCATGGGACATCACCATCAGCTACTAA 2175 0.4133 MAATSSTHWFQTRMFSPPTTTPPLTSPFSTFLWPHQRLLSKGCRRSMFMNAKPLLKDGTLSVNGKDALKGVPENVVVTPFTGSSAFIGASCADAASSSLESFILDGEFRSSLQGNSSNELELCVESGDPAVVTSQSLNAVFMNYGDHPFDLVKESMKVLSEHTGTFSLRETKQMPGMLDCFGWCTWEAFYHSVNPQGIKDGLRSLSEGGTPAKFLIIDDGWQDTVNEFQKDGEPFIEGSQLISIKENNKFRAAGDVTKNGAPHGLKDFVSEIKNTFGLKYVYVWHALLGYWGGLDPNASGTKKYDPKLRYPVQSPGNLANTRDLSIDAMEKYGIGVIDPAKISEFYDDIHSYLISQNIDGVKIDVQNILETISSGLGGRVFLTRHFQQALEKSISTNFQDNSIICCMGHNTDSIYHSKQSAITRASDDYYPKNPTTQSLHIAAVAFNSIFLGEIVIPDWDMFYSLHDAAEFHAVARAVGGCGVYVSDKPGQHDFNVLKKLVLPDGSVLRARYPGRPSRDCLFIDQVMDKKSLLKIWNLNKCGGVIGIFNCQGAGSWPGLESNAEEDIIPELSCKVSPSDIEYFEEVSAGPWTQDCAVFRFNTGSLMRLSKEESFDITLKVLQCEVFTVSPIKVYNQTIQFAPIGLTNMYNSGGTVEAVDSSDSSGCKIHIRGRGGGDFGAYSNLKPKSCSVNSEDLEFQFREGDNFFGVTIPAKTSSWDITISY 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00220 724 PANTHER - 103 717 IPR008811 -
Pumo2g00220 724 SUPERFAMILY (Trans)glycosidases 177 501 IPR017853 -
Pumo2g00220 724 MobiDBLite consensus disorder prediction 1 20 - -
Pumo2g00220 724 Gene3D Aldolase class I 177 496 IPR013785 -
Pumo2g00220 724 FunFam Uncharacterized protein 178 502 - -
Pumo2g00220 724 Pfam Raffinose synthase or seed imbibition protein Sip1 103 702 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00220 Pumo-Chr2 4228988 4240282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00220 103 722 Glycoside Hydrolase AT1G55740 47.867 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00220 - - gmx:100819413 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00220 2 4228988 4240282 Pumo2g00220 2 4228988 4240282 ECH