Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00102 ATGGCTCTCAGATTTTTCTGCACTACAAATATTTCAACCCAACATCATCATGCTTCTGCAGCTAAAACTCTTGTTTCCTCTTCTCTCTCTCTAACAAACTCACTTATGCGTAGTTCCACCCCTGCGAGAAACAGCAAGAACAAGTGTAACGTGAAGAGCCTCGTCAACACTGTCGTGCTTCCTTCCATTTCATCTACTCCACTTGACTCACTCCACAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGTTTTGAGGATGTTGTTGATATCAGAAATCTCAGTCTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGTGCTGCTGATGCATCGGTTGTTAGTGCTGTGAATGAAGGAATTGAAGCTGCGAGAGATATTGTATGCCTTAGAAGGCCGTGGGTGATGATCAGTGTCAATGATGATAAAGATCTTCATTTTCGTAAGGCTGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCCAATGCAATAACATTCCAAGGGAAATCTACTTCAGGAATTTCACACAATACTGATGCACCAAGAGTACTGAAGGATGGAGTCATAACAGAGCGCTGCTATGGCTGTGGTCGATGTCTTCCAGTTTGCCCCTACGATAAAATAAGAGAGGTAACATATGTACGAGATGCTATTACAACTGCTGATCTCATCAAGAGAAATGATGTTGATGCTATGGAGATACATACAAGTGGGAGACAGAGTACTTTGTTCCAAGAACTCTGGAGTGCTCTAGGAGATTCAGTCAGAAATTTGAAGCTTATAGCTGTTAGCTTACCTAATGGTGGTGACTCAACAATATCCTCTATGAACAAAATGTTCTCTATTATGAAACCCAATCTTCAAAGCTTCAACTTATGGCAGTTAGATGGTCGTCCTATGAGTGGAGATATTGGGAGAGGAGCAACCAAGGAATCAATTGCCTTTGCTGTTCAATTGGCTAAGGCAAAAGAAAGACCTCCTGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATTGATGGGTTGAAGAAAGAGGGACTCTTTCAAACAACTATTACCGAATACTTACATGATGGTACGTCAACAATAAGGTCATCTGATTCATCACATGCTTTAATTAGCGGCATAGCTTATGGTGGCTATGCAAGGAAGATTGTTGGAAGAGTATTGAGATCCATGCAATCCCAACATGGTGGAGCTGCTTCAATTGAGGATCACCCAGAGCATCTCTTGATGGCTCTTAAGGAAGCACTTGCATTGGTGGGGCCTATTAAATGTCTATGA 1323 0.4263 MALRFFCTTNISTQHHHASAAKTLVSSSLSLTNSLMRSSTPARNSKNKCNVKSLVNTVVLPSISSTPLDSLHRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDIVCLRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAITFQGKSTSGISHNTDAPRVLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADLIKRNDVDAMEIHTSGRQSTLFQELWSALGDSVRNLKLIAVSLPNGGDSTISSMNKMFSIMKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAKERPPGFLQLAGGTNAHTIDGLKKEGLFQTTITEYLHDGTSTIRSSDSSHALISGIAYGGYARKIVGRVLRSMQSQHGGAASIEDHPEHLLMALKEALALVGPIKCL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00102 440 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 149 180 IPR017896 -
Pumo2g00102 440 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 IPR017900 -
Pumo2g00102 440 SUPERFAMILY 4Fe-4S ferredoxins 139 229 - -
Pumo2g00102 440 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 70 233 - -
Pumo2g00102 440 Gene3D - 143 257 - -
Pumo2g00102 440 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 195 224 IPR017896 -
Pumo2g00102 440 Pfam Iron-Sulfur binding protein C terminal 234 435 IPR021039 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00102 - - gmx:100804088 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00102 2 2100610 2104834 Pumo2g00102 2 2100610 2104834 ECH