Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00070 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCATGGATTGAATCACAAAAAAGGGGTTTCTGGTGGTGTGCTTCCGGGAATGAAAGGGCATGCTAAAGGAGGGCCCGTGAAGGTTTTCCCGGGAGAGGAACTCGCAGACGGCGATAGGCCTAGTGGTGTTTCGCAGCCTGCATGTGTTGCTAGTTCTTCAGGTGATGACTATAACAATGAGCAGAGGTCTGAAAAGACTTCTAGGAAAGAGAAGCAAGGGATGGCTGCAAAGCATGACCTGGAGGAGTCCTTGTCCTTTGAGAGTAATTCGGGGGATGCCAGTCTGAATTCTGAAGCTTCATCACAAGAAGAAGAAAATGGGACTTTACCTAGGAGTAATCAAGGTCAACAGAGTATGAAGAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAAAAGTGTGGTGGAAAAAGTAGAGCTTGCCGATAATGTGATAATTAGGAGATTAAGGTTGTCAATGTTATCCATCTTTACAGCAGTTTTAGAGTGGCTAACCAGGCAGATTCCATTGTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTGTCATACTGTCAGAACAAAGTTTGTGCAGGCATATCCTGTTGTTCTGAAGTGGCTCATGCATTTTGGAAACATAATGCTCCTATTATCAGTGTTTTGGTTGGACTGTGCCCTTCGGGGTGTTGATTCATTTGTGCGTATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTAGCATATTCTCGGTGATTAGTATGATAGGGATGATCAAGTTTCTTGCTGTCCTGGGCTTGGCCGCCTTGATTGGATTTTTTCTTGGGCTCATGCTTGCAATTTTGGTAGTTGCAATCATTGGAGTTATTATCTTGTGGTTTTATGGTAGCTTTTGGACAACGGCATTTTTCATCATCCTTGGAGGACTGGCATTTATGTTAAGTCATGAACGGGTGGCACTACTTATCACCACAGTGTATTCTGTCTATTGTGCATGGATGTATGTTGGGTGGCTTGGTTTGCTATTGGCTTTTAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTGAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGCATGGTCAACCAGGATTTAGTGATGAACCAACACATGCTTCTTCCTCTGAAAATGGACAGGGACCATCAGCAGATCGCAATGCTGGCATTCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTTGTCCGTTTGTTGAACTGCTCTGATCATTATGCAGCACTGGGATTCACGCGGTATCAAAATATAGACGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGATAAAAATATGGGTAATGAAAAGGCCGCAGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAGGAGATTTTGAGTGTATTTCGTAGATTTCATGATGCTTCTCGTAAGAATGGTAGGCATGGACTCTTTCCTTCAGGATTTGCACGGTCTGATGCAGATAGCGAGGACCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTAGTGGCTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGTTTCTTCTTAA 1743 0.4274 MARKGNQQKNGVDRHGLNHKKGVSGGVLPGMKGHAKGGPVKVFPGEELADGDRPSGVSQPACVASSSGDDYNNEQRSEKTSRKEKQGMAAKHDLEESLSFESNSGDASLNSEASSQEEENGTLPRSNQGQQSMKSRLSCILDSLHLKSVVEKVELADNVIIRRLRLSMLSIFTAVLEWLTRQIPLFVSLRTIMFKACHTVRTKFVQAYPVVLKWLMHFGNIMLLLSVFWLDCALRGVDSFVRMGTTSFFSVIWCSIFSVISMIGMIKFLAVLGLAALIGFFLGLMLAILVVAIIGVIILWFYGSFWTTAFFIILGGLAFMLSHERVALLITTVYSVYCAWMYVGWLGLLLAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMHGQPGFSDEPTHASSSENGQGPSADRNAGIPSTSGVDSDVTSEDEVVRLLNCSDHYAALGFTRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREEILSVFRRFHDASRKNGRHGLFPSGFARSDADSEDPFGDSRRIACKRCSGFHVWIHTKKQKSRARWCQVSS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00070 580 Gene3D DnaJ domain 427 517 IPR036869 -
Pumo2g00070 580 SUPERFAMILY Chaperone J-domain 434 511 IPR036869 -
Pumo2g00070 580 CDD DnaJ 439 495 IPR001623 -
Pumo2g00070 580 ProSitePatterns Nt-dnaJ domain signature. 483 502 IPR018253 -
Pumo2g00070 580 PANTHER OS03G0832900 PROTEIN 1 577 - -
Pumo2g00070 580 MobiDBLite consensus disorder prediction 393 424 - -
Pumo2g00070 580 MobiDBLite consensus disorder prediction 72 99 - -
Pumo2g00070 580 SMART dnaj_3 438 498 IPR001623 -
Pumo2g00070 580 MobiDBLite consensus disorder prediction 378 424 - -
Pumo2g00070 580 Pfam DnaJ domain 439 503 IPR001623 -
Pumo2g00070 580 MobiDBLite consensus disorder prediction 100 131 - -
Pumo2g00070 580 ProSiteProfiles dnaJ domain profile. 439 506 IPR001623 -
Pumo2g00070 580 PRINTS DnaJ domain signature 478 498 IPR001623 -
Pumo2g00070 580 PRINTS DnaJ domain signature 461 476 IPR001623 -
Pumo2g00070 580 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00070 Pumo-Chr2 1516688 1522527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00070 1 577 Miscellaneous Gene Families AT5G49580 48.877 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00070 K09534 - gmx:100789594 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00070 2 1516688 1522527 Pumo2g00070 2 1516688 1522527 ECH