Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00060 ATGGTGAAGGTGCGCATGAACACCGCCGATGTCGCCGCCGAGGTCAAATGCCTCCGCCGGCTAATCGGAATGCGATGCTCCAACGTCTACGATCTCTCTCCCAAGACCTACGTGTTCAAGCTTATGAACAGCAGTGGAGTTTCTGAATCCGGGGAGAGCGAGAAGGTTCTGCTGCTGATGGAAAGTGGCGTGAGATTGCACACTACTATCTACATGCGTGACAAAAGCAACACCCCTTCTGGTTTCACTCTCAAATTGAGGAAGCACATTCGGACCAGAAGGCTCGAGGATGTGCGCCAACTTGGGTACGATCGGATTATTCTCTTTCAATTTGGACTTGGGGAGAATGCAAACTATGTTATATTGGAGCTGTATGCTCAGGGGAACATCCTCCTCACAGATTCTAATTTTACTGTCATGACTCTGCTACGGTCTCACAGGGACGATGATAAAGGGCTTGCAATTATGTCACGCCATCGTTACCCTGTGGAAAGTTGTAGAGTTTTTGAGCGAACTACTATTGAAAAGTTGCGGACATCCCTAGTGTCTTCCAAGGAAGATGATAATGATGAGGCTGTTAAGGCCAATGGAAATGGAAGTAATGCTTCTAATGTAGCGAAAGAGAAGCAGGGAACCCAAAAAGGTGGGAAGTCGTCTCCCACATTGAAAATTGTCCTTGGGGAGGCACTTGGTTATGGACCTGCACTTTCTGAACATATAATATTAGATGCTGGCCTAATCCCCAGTACAAAAGTTCCCAAAGATAGAACGTGGGATGATGCTACTGTTCAGGCATTGGTCCAAGCTGTTGTGAAGTTTGAAGATTGGATGCAGGATGTTATTTCAGGTGAAATAGTCCCTGAAGGATACATTTTGATGCAGAACAAAAATCTGGGGAAGGATTCTTCCATATCTCAACCAGGAAGTGTTAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAGTTTAAGTCAAGGGATTATACAAAGTTTGAGACATTTGATGCAACCTTGGATGAGTTCTATAGCAAAATTGAGAGTCAAAGGGCTGAACAACAGCAGAAAGTCAAAGAAAACTCAGCTGCTCAGAAACTTAATAAGATTCGCCAGGATCAGGTTGGTGCTCTTGCCCTGTTGTCCAAACTAACACACTTCTGGAAAGTCAGCCGAACCATGTGCACACTATTGTTTCTGGAATATCTCATTCTGGATCATACTTGGGAAAATCGAGTACATGTTTTGAGGAAAGAAGCTGATCACTGTGTTAAGATGGCAGAATTAATAGAATACAACTTGGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAGGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCCGGAAACCCTGTAGCTGGTCTCATTGACAAGCTCCATCTTGAGAGGAACTGCATGACTTTACTGTTAAGCAACAATCTTGATGAAATGGATGATGATGAGAAGACACTCCCTGTGGATAAGGTTGAAGTTGATTTAGCTCTCTCAGCACATGCCAATGCTCGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGAAAAAACTGTAACTGCCCATGAAAAGGCTTTTAAAGCTGCAGAGAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGTAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAACTATTTGGTTATCAGTGGACATGATGCACAGCAAAATGAGCTGATAGTGAAGCGTTATATGTCAAAAGGAGATCTATATGTACATGCTGATCTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAGCCTGCACAACCAGTTCCACCTCTGTCCCTAAATCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCGAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAAGTTAGTAAAACTGCTCCTACGGGTGAATATCTGACAGTAGGGAGTTTCATGATCCGTGGAAAGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGCCTACTATTTCGCTTGGATGAGAGTTCCTTGGGATCCCATTTAAATGAAAGAAGAGTAAGAGGAGAGGAGGAAGCAGCAGATGATTATGAAGAAACTGGCCCTCTAGAAGACAAATCTGATTCAGAGTCTGAGAAAGATGTCACTGATATAAAATCCACAACTGACTCAGAAAGGAATGGTAATTTGTTGGCAGATTCACACAAACCCCTACCAGAAGACTTCCCTGCAGATTCATCTCAAACTAATTTGGCTACTATCAATGCCGAAACTTCAATTTCACAGGATTTCCCCGCAAAAGAGACAAGTATGTTGAATATGGTTGATAGGAAGATATTATCAGATGGAACTGGAAATGGCTTAGCATCTGTCACCCCTCAACTTGAGGAACTTCTTGATCAAGCTCTGGAACTTGGATCTGTTGCTAAATCAAGTAAAAAATATGGAACTGAGAAGACTCAAATTGATTTAGACACTGAACAACATTTTGAACAAAGCAAAGCTGCAGTAAGGGATAAACCTTATATATCTAAAGCTGAGAGACGAAAGCTTAAAAAAGAACAGAAACATGGAGAAGCAGATTCGAATGTTGAACATGGAATGGATGAATCAAAGCTAAAAGATATTTCTGCTAATCTACCAGTGAAAGAAGATCAAAATTTGAAAAAAGGTGGTGGTCAAAAAATCAGCCGTGGACAGAAGGGCAAACTTAAGAAGATAAAGGAGAAGTATGCTGACCAGGACGAGGAAGAAAGGAGCATCCGAATGGCATTGTTGGCTTCTTCTGGAAAATCAATCAAGAAGGAAGAGACGTCATCTGAAAATGATGCATTGGACAAAGGGAAAAAACCTGGCAGTGGTCCTTCTGACGCTCCAAAAATATGTTACAAGTGTAAGAAGGCAGGTCACTTATCTCGGGATTGTAAGGAGCAACCAGATGATCAAATGCATAGGAATGCAATTGGTGAAGCTGAAGAAAATCCCAAAACGACTTCTATTGACACTTCCCAACCAGATAGGGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTAAATGACGTGGATTACTTGACTGGGAATCCACTTCCTAATGACATTCTCTTATATGCTGTTCCTGTTTGTGGTCCTTACAGTGCAGTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCGCTGAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACTTATTCAGCCACATGTCCGAAGCAACAACCCGGGAGAAGGAGTTGATGAAAGCCTGCACAGATCCTGAGCTAGTTGCTGCAATTATTGGTAATGTGAAAATATCAGCAGCTGGCCTTACTCAATTGAAGCAAAAACAAAAGAAAGCCAAGAAGAGCAGCAAACAAGAGAGTTAG 3516 0.4229 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHTTIYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDSNFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLRTSLVSSKEDDNDEAVKANGNGSNASNVAKEKQGTQKGGKSSPTLKIVLGEALGYGPALSEHIILDAGLIPSTKVPKDRTWDDATVQALVQAVVKFEDWMQDVISGEIVPEGYILMQNKNLGKDSSISQPGSVSQMYDEFCPILLNQFKSRDYTKFETFDATLDEFYSKIESQRAEQQQKVKENSAAQKLNKIRQDQVGALALLSKLTHFWKVSRTMCTLLFLEYLILDHTWENRVHVLRKEADHCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFISSENYLVISGHDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPAQPVPPLSLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEAADDYEETGPLEDKSDSESEKDVTDIKSTTDSERNGNLLADSHKPLPEDFPADSSQTNLATINAETSISQDFPAKETSMLNMVDRKILSDGTGNGLASVTPQLEELLDQALELGSVAKSSKKYGTEKTQIDLDTEQHFEQSKAAVRDKPYISKAERRKLKKEQKHGEADSNVEHGMDESKLKDISANLPVKEDQNLKKGGGQKISRGQKGKLKKIKEKYADQDEEERSIRMALLASSGKSIKKEETSSENDALDKGKKPGSGPSDAPKICYKCKKAGHLSRDCKEQPDDQMHRNAIGEAEENPKTTSIDTSQPDRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYSAVQSYKYRVKIIPGPLKKGKAAKTAMNLFSHMSEATTREKELMKACTDPELVAAIIGNVKISAAGLTQLKQKQKKAKKSSKQES 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 738 755 - -
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 185 218 - -
Pumo2g00060 1171 Pfam NFACT protein RNA binding domain 576 687 IPR008532 -
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 865 994 - -
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 717 780 - -
Pumo2g00060 1171 Pfam NFACT protein C-terminal domain 1056 1149 IPR021846 -
Pumo2g00060 1171 Gene3D - 990 1044 - -
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 194 218 - -
Pumo2g00060 1171 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 865 913 - -
Pumo2g00060 1171 FunFam nuclear export mediator factor Nemf 6 163 - -
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 968 984 - -
Pumo2g00060 1171 SUPERFAMILY Retrovirus zinc finger-like domains 984 1017 IPR036875 GO:0003676|GO:0008270
Pumo2g00060 1171 MobiDBLite consensus disorder prediction 940 956 - -
Pumo2g00060 1171 Pfam Zinc knuckle 995 1011 IPR001878 GO:0003676|GO:0008270
Pumo2g00060 1171 ProSiteProfiles Zinc finger CCHC-type profile. 996 1011 IPR001878 GO:0003676|GO:0008270
Pumo2g00060 1171 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 1 1147 - -
Pumo2g00060 1171 Pfam NFACT N-terminal and middle domains 10 161 - -
Pumo2g00060 1171 SMART c2hcfinal6 995 1011 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00060 K24971 - gmx:100807437 2049.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00060 2 1299412 1309126 Pumo2g00060 2 1299412 1309126 ECH