Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01004 ATGGCCAGCTCCAGTGGCACAAAGGATGGTCCTTTTGAGATGGGTAGGCAGTCATCAAAGAGGATGGTGAGGGCTCCTACCAGGAATGTGGACTTGAAAAATGAGGAGGGTGTGGTGGACAGTGAGATTGTGCCTTCTTCACTTGCTGTGCTTGTGCCTATTCTCAGAGCAGCCCTTGAGATTGAGGAGGAGAATCCCAGAGTTGCCTATCTTTGTCGCTTCCATGCGTTTGAGAAGGCCCATAAAATGGATCCAAAATCAAGTGGGCGTGGTGTTCGTCAGTTCAAGACTTACCTATTGCACAAACTGGAAAAGGAAGGAGAGCTTACAGAAAAACTTGTTCAAAGAAGTGATGCTAGGGAGCTGCAGGCCTACTACCAACATTTCTATGAGAAGAAAATCCGGGATGGAGAATTTTCCCAAAGACCGGAGGAGACGGCTAAGAATGTTCAGATTGCCACTGTATTGTATGAAGTGCTAAAGACTATGGTAGTTCCACAAAATACTGAGGAGAAGACAAGAAGGTATGCTGAGGATGTTGAGCAAAAGAGGGGACAATATGAAATCTATAACATCCTTCCATTATATGCAGTTGGTGTTAAACCAGCAATCATGGAACTTCCCGAGATCAAATTAGCAATTGAGGCTTTAGGTGGAGTGGATAATCTTCCAATTCCCACAATTCGTGCAAGACCTGATGGTTCTCATGATGATTCTACAATGCCTACGGATAGGCGTAAGAAAGTGAATGATATACTTGATTGGATTGCCTCAATTTTTGGGTTTCAGAAAGGAAATGTGGCAAATCAAAGGGAGCACCTTATATTATTACTTGCCAACATTAATATAAGGAACAGGGACGAACCATCTTATCAGCTCCATGTAGAAACTGTAGAGAAGCTGATGGCTACAATTTTCAAAAATTATGAGTCATGGTGTCATTATGTGCGTTGTGAATCCAATCTTAGGTTTCTAGAAGATTATGACTTGCAACAGATAGAGCTGATATATATTGCACTTTATCTTCTAATTTGGGGAGAAGCTTCAAATATTCGCTTTATGCCTGAATGTATTTGCTATATTTTCCATCATATGTGCCATGAAGTCTATAAGATTTTAGATAAGAATCCTGCTCGTGTGACTGGGAGCACAAACCTAGTAGAAGGACGAGATGATGAACATTTTCTCAGGGAAGTCATAACTCCTATATATCAAGTTTTAATGAAGGAAGCAAAGAGAAACAACAAAGGCAAGGCAAGCCATTCCAATTGGAGAAATTATGATGATCTTAATGAATACTTCTGGTCTAAGAAATGTTTTGATGATCTAAGTTGGCCATTGAATCCCAAAGCTGATTTTTTTAGGCATTCAGATGAGACACAGACAAGACATCGGCGCCGTAGCCATGCCAACACTGCTGTTGGAAAGAGGAAGCCCAAAACAAGTTTTGTTGAAGTTCGTACGTTTTTGCACCTTTATAGGAGTTTTGATCGAATGTGGATATTCTTTATATTGGCTTTACAGGCAATGATCATCATAGCATGGAGTTCCTTGGGACCTGTTGGAGTGTTTTTTGATGGAGATGTCTTCAGAAATGTTATGACTATATTCATTACATATGCTTTTCTCAATTTTCTTCAAGTAACTCTAGATATTATTCTCACATGGAACGCATTGAAGAATATGAAATTTACTCAGTTGCTTCGATATTTTCTGAAATTTGTGGTAGCAGCTGTTTGGGTTGTTGTTTTGCCAGTCTGTTATTCCAGTTCTCTAGTGAATCCATCAGGGCTTATAAGATTTGTCACCAGTTGGGCTGGGGATTGGGGGAACCAGTCACTTTACACCTATGTTGTTGTATTATATATGTTACCAAACATAGTGGCTGCAATACTATTTTTCCTTCCTCCACTGCGGAGAAACTTGGAGCGCTCAAATATGCGAATCATTACCATTTTGATGTGGTGGGCTCAGCCAAAATTGTATATAGGAAGAGGCATGCATGAGGATATGTTATCACTGCTGAAGTACACCCTCTTCTGGATCATGCTGCTGATTAGCAAGTTTGCATTCAGCTACTATGTGGAGATATCGCCCCTTGTTGGACCCACAAAATTAATCATGGGGATGTCTATAGATAACTACCAGTGGCATGAGTTCTTTCCAGAAAATGAGACTCACAATATATGTATTGTCATTGCAATATGGGCTCCAATTATCCTGGTTTATTTTATGGATACTCAAATATGGTATGCTATTTATGCCACTCTATTTGGTGGCATTATTGGAGCCTTCAGCCATTTGGGAGAGATAAGGACACTTGGAATGCTCCGCTCCAGATTTGAATCTGTACCGGTAGCTTTCAGTCAGCGCTTTTGGACTGGAAGAGACAAAAAGACTAAACCGGAGGAACCGGATGATACATATGAACGGAATAATATTACATACTTTTCTCAGGTTTGGAATGAGTTTATAAATTCTATGAGAGAGGAAGACCTCATCAGTGACAGGGATAGAGATTTGCTTCTTGTACCATACAGTCCAAGTTATGTTTCTGTCATTCAGTGGCCTCCATTCTTGCTTGCTAGTAAGATTCCTATAGCTGTTGACATGGCAAAAGATTATACGAAGGAGACCGATGATGATTTATTTAGAAAGATTAAGAACGATGGGTATATGTATTCAGCAGTTGTTGAATGCTATGAGACTCTCAGGGAGATCATACATAACCTTCTGCTTGATGATGAAGATAGGCAGGTTGTGGACCGTATATGCAGTAAAGTAAACCAGTGCATACATGAAAAAAAATTTGTCAAGGAATTCAATATGAGTGGCTTACCTTCACTCAGTGAGAAGTTAGAGAAATTCCTAACTCTACTGCGATCTGAAGATGGCAAACTAGAATCCCAGATAGTCAATGTCCTGCAAGATATTGTAGAAATTATCATACAGGATGTTATGTTTGATGGCCATAAGGTGCTGCAAACACCTCTGGAAACACCTCAGCAATATCATGTAGAGAAAGGGCAGAAGTTTGTCAACATTGACACTTCTTTTACAGATAATAGATCAGTGATGGAGAAGGTTATTAGGCTTCATTTGCTTTTAACAGTCAAGGAATCAGCCATAAATGTGCCCCAAAATATTGAAGCCCGCCGCCGTATTACATTCTTTGCAAACTCCTTATTTATGAATATGCCAAAGGCTCCCAAAGTAAAGGACATGTTGTCCTTCAGTGTTCTGACACCCTATTTCAAAGAAGATGTTCTATATTCTGAAGAGGAACTCAATAAGGAAAATGAAGATGGAATATCAATTTTATTCTACCTAACCAAGATATATCCTGATGAATGGGCCAATTTCCATGAACGACTAAAAAGTGAACAACTTGAAGAAGATAAGGAGGAATTAATTCGTCGGTGGGCATCTTACAGAGGACAGACACTCTGTCGAACAGTGAGAGGAATGATGTACTATTGGCAAGCTTTGATCCTTCAGTACTTCATGGAATCTGCAGGAGACAATGCTCTCTCTGAAGGCTTCCGGACAATGGATTCCTATGACAAAAATAAGAAGCTTCTCGAAGATGCACAAGCTATGGCCGATTTAAAGTTCACCTATGTTGTTTCTTGTCAAGTGTATGGTTCTCAGAAGAAGTCCAAAAATACTAGAGACAGAAGCTGCTATACTAACATTCTCAATCTGATGTTAATGCATTCAGCCCTTCGTGTTGCTTACATAGATGAAACAGAAGAGACAAAGGATGAAAAATCTCAGAAAGTTTATTACTCTGTTCTTGTCAAGGGAGGGGATAAGTATGATGAGGAAATATATCGCATCAAGCTACCTGGTCCTCCAACAGAAATCGGTGAAGGGAAACCTGAAAACCAAAATCATGCCATTATATTTACTCGTGGAGAAGCCTTGCAGACCATAGACATGAATCAGGATAACTATTATGAAGAAGCTTTCAAAATGAGAAATGTATTGGAAGAATTCCGGAAAGGACGTAGTGGACAACGGAAACCCAGCATATTGGGTATAAGGGAGCATATATTTACTGGAAGTGTTTCTTCACTTGCTTGGTTTATGTCAAACCAGGAGACCAGTTTCGTGACCATTGGCCAACGAATTTTAGCAAATCCTTTAAGGGTTCGGTTTCATTATGGTCATCCTGATATATTTGACAGAATCTTCCACATAACAAGAGGTGGCATAAGCAAAGCATCAAAAGTTATAAACTTAAGTGAGGATATATTTGCAGGGTTCAATTCAACTCTACGTCAAGGATATATCACACATCATGAATACATACAAGTAGGTAAGGGGCGTGATGTGGGCATGAATCAGATATCACTCTTTGAGGCTAAGGTTGCAAATGGAAATGGAGAACAAACACTTAGCCGTGATGTTTATCGACTTGGACGACGATTTGACTTCTACAGAATGTTGTCATTCTACTTCACAACAGTTGGGTTCTACTTCAGTAGCATGATAACTGTGTTGACTGTGTATGTGTTCTTATATGGACGTTTATATATGGTTTTGAGTGGAGTTGAGAAAGAAATTCTTCAAAGTCCAAACATACATCAGAGCAAAGCCCTTGAAGAGGCCTTGGCAACTCAGTCTGTTGTTCAGTTGGGCTTACTGCTTGTGCTGCCCATGGTTATGGAAATTGGCTTGGAGAAGGGATTTCGCACTGCCTTGGGTGATTTTATCATCATGCAGCTGCAGCTAGCCTCTGTGTTCTTTACTTTCCAGCTTGGAACAAAAGCTCATTATTATGGAAGAACACTCTTACATGGGGGCTCTAAATATAGACCAACCGGTCGTGGATTTGTTGTCTTCCACGCGAAGTTTGCTGATAACTACAGGATGTACTCGCGAAGTCATTTTGTGAAGGGCCTAGAGATACTCATACTATTGATTGTTTATGAAGTCTATGGGGAGTCATATCGCAGCTCGCATCTTTATTTATTCATCACAATCTCAATGTGGTTCTTGGCCACTTCCTGGCTGTTTGCTCCTTTCTTGTTCAATCCTTCTGGCTTTGATTGGCAAAAAACAGTGGATGATTGGACAGATTGGAAGCGGTGGATGGGAAATCGCGGTGGTATTGGTATTTCAGCTGATAAAAGCTGGGAATCTTGGTGGGATGAAGAAAATGAACACCTGAAATACTCAAATCTCAGGGGAAAAATAATTGAGATCATTCTTGCATTTCGCTTCTTTATGTACCAATATGGAATTGTCTACCACATGGACATTACTCATCATAACAAAGATTTGCTGGTATTTGGGCTTTCTTGGGCAGTTTTGATAATAATACTTATTGTATTGAAGATGGTATCCATGGGAAGGCGAAAATTTGGCACCGACTTTCAGCTCATGTTTCGTATTCTTAAGGCACTTCTCTTTCTAGGGCTTCTTGTCGGTCATGACTGTACTATTTGTGGTATGTGGACTTACCATATCAGATTTGTTTGCTGCCATTATCGCCTTCATGCCATCTGGATGGGCAATCATTCTGATTGCACAAGCATGCAAGGTATGCTTGAAAGGAGCTAA 5568 0.4009 MASSSGTKDGPFEMGRQSSKRMVRAPTRNVDLKNEEGVVDSEIVPSSLAVLVPILRAALEIEEENPRVAYLCRFHAFEKAHKMDPKSSGRGVRQFKTYLLHKLEKEGELTEKLVQRSDARELQAYYQHFYEKKIRDGEFSQRPEETAKNVQIATVLYEVLKTMVVPQNTEEKTRRYAEDVEQKRGQYEIYNILPLYAVGVKPAIMELPEIKLAIEALGGVDNLPIPTIRARPDGSHDDSTMPTDRRKKVNDILDWIASIFGFQKGNVANQREHLILLLANINIRNRDEPSYQLHVETVEKLMATIFKNYESWCHYVRCESNLRFLEDYDLQQIELIYIALYLLIWGEASNIRFMPECICYIFHHMCHEVYKILDKNPARVTGSTNLVEGRDDEHFLREVITPIYQVLMKEAKRNNKGKASHSNWRNYDDLNEYFWSKKCFDDLSWPLNPKADFFRHSDETQTRHRRRSHANTAVGKRKPKTSFVEVRTFLHLYRSFDRMWIFFILALQAMIIIAWSSLGPVGVFFDGDVFRNVMTIFITYAFLNFLQVTLDIILTWNALKNMKFTQLLRYFLKFVVAAVWVVVLPVCYSSSLVNPSGLIRFVTSWAGDWGNQSLYTYVVVLYMLPNIVAAILFFLPPLRRNLERSNMRIITILMWWAQPKLYIGRGMHEDMLSLLKYTLFWIMLLISKFAFSYYVEISPLVGPTKLIMGMSIDNYQWHEFFPENETHNICIVIAIWAPIILVYFMDTQIWYAIYATLFGGIIGAFSHLGEIRTLGMLRSRFESVPVAFSQRFWTGRDKKTKPEEPDDTYERNNITYFSQVWNEFINSMREEDLISDRDRDLLLVPYSPSYVSVIQWPPFLLASKIPIAVDMAKDYTKETDDDLFRKIKNDGYMYSAVVECYETLREIIHNLLLDDEDRQVVDRICSKVNQCIHEKKFVKEFNMSGLPSLSEKLEKFLTLLRSEDGKLESQIVNVLQDIVEIIIQDVMFDGHKVLQTPLETPQQYHVEKGQKFVNIDTSFTDNRSVMEKVIRLHLLLTVKESAINVPQNIEARRRITFFANSLFMNMPKAPKVKDMLSFSVLTPYFKEDVLYSEEELNKENEDGISILFYLTKIYPDEWANFHERLKSEQLEEDKEELIRRWASYRGQTLCRTVRGMMYYWQALILQYFMESAGDNALSEGFRTMDSYDKNKKLLEDAQAMADLKFTYVVSCQVYGSQKKSKNTRDRSCYTNILNLMLMHSALRVAYIDETEETKDEKSQKVYYSVLVKGGDKYDEEIYRIKLPGPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFRKGRSGQRKPSILGIREHIFTGSVSSLAWFMSNQETSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGISKASKVINLSEDIFAGFNSTLRQGYITHHEYIQVGKGRDVGMNQISLFEAKVANGNGEQTLSRDVYRLGRRFDFYRMLSFYFTTVGFYFSSMITVLTVYVFLYGRLYMVLSGVEKEILQSPNIHQSKALEEALATQSVVQLGLLLVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYYGRTLLHGGSKYRPTGRGFVVFHAKFADNYRMYSRSHFVKGLEILILLIVYEVYGESYRSSHLYLFITISMWFLATSWLFAPFLFNPSGFDWQKTVDDWTDWKRWMGNRGGIGISADKSWESWWDEENEHLKYSNLRGKIIEIILAFRFFMYQYGIVYHMDITHHNKDLLVFGLSWAVLIIILIVLKMVSMGRRKFGTDFQLMFRILKALLFLGLLVGHDCTICGMWTYHIRFVCCHYRLHAIWMGNHSDCTSMQGMLERS 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01004 1855 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 172 1813 - -
Pumo1g01004 1855 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 335 446 IPR026899 -
Pumo1g01004 1855 Gene3D - 36 182 IPR023175 -
Pumo1g01004 1855 Pfam Vta1 like 52 177 IPR039431 -
Pumo1g01004 1855 Pfam 1,3-beta-glucan synthase component 1045 1135 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Pumo1g01004 1855 Pfam 1,3-beta-glucan synthase component 1138 1735 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Pumo1g01004 1855 SMART FKS1_dom1_2 332 448 IPR026899 -
Pumo1g01004 1855 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01004 Pumo-Chr1 15786071 15815571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01004 1 1820 Glycosyltransferase AT1G06490 68.427 0.0 2552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01004 K11000 - gmx:100815000 3361.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g01004 1 15786071 15815571 Pumo1g01004 1 15786071 15815571 ECH