Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00943 ATGGCTTCTATCCCATGCATTACCCACCAACCCATCATCACTTCCAAGCCCAACAATGCCTTGCCTTCACCGCATGTTCCTGCCTCACGGTTTCTGGGCATCAGAAAAAGAGTTGGGTGGCCCGGCCTCACCTCTAGAATTGGACCCTCCAACGGCTCCAAAGCCACATGCTGGTTCAGGTTCGGCAAGAACGGTGTTGATGCCGAAGGTGCTGGCATCTATGGCAGCCAGGGCCGTGATGATTTTGATAGAGATGATGTGGAACAGTACTTCAACTATATGGGGATGCTCGCTGTAGAAGGAACATATGATAAAATGGAGGCTCTTCTGAGCCAAAACATTCACCCCGTGGACATCCTTCTCCTGTTAGCTGCCTCAGAAGGTGACAAGCCAAAACTTGAAGAACTCTTGAGAGCTGGAGCAAAATATGATGTAAAAGATGCAGATGGACGGACGGCGCTTGAAAGGGCTACCGACGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAGAGGGCATGA 522 0.4885 MASIPCITHQPIITSKPNNALPSPHVPASRFLGIRKRVGWPGLTSRIGPSNGSKATCWFRFGKNGVDAEGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKLEELLRAGAKYDVKDADGRTALERATDEIKDFILNFSVQRA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00943 173 Gene3D - 79 170 IPR036770 -
Pumo1g00943 173 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 173 IPR044242 GO:0006886|GO:0009570|GO:0090391
Pumo1g00943 173 FunFam Protein LHCP TRANSLOCATION DEFECT 81 172 - -
Pumo1g00943 173 SUPERFAMILY Ankyrin repeat 96 158 IPR036770 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00943 - - gmx:100499940 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00943 1 14550783 14554850 Pumo1g00943 1 14550783 14554850 ECH