Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00940 ATGATTTTGAACTGTCTCTATGACGCGGCCACCGACCCCAAGCCCGCCGTCAAGCGGGACGCCCTCCGCCTCCTCGCCGCCGTCTGCGCCGCCCACTCCGACGCCGCCGCCGCCCACCTCACCAAGATCATCGCCCACGTCGTCCGCCGCCTCAAGGACGCCGACTCAGCCGTCCGCGACGCCTGCCGCGACACCGTCGGCGCCCTCGCCGCGCAGTATCTGAAGGGAGACGGCGGCGGAGGGGGTGTCGGGACGGTGGTGGGGCTGTTTGTGAAGCCGCTGTTCGAGGCGATGGGGGAGCAGAACAAGGGCGTGCAGGCGGGGGCGGCGGTGTGCATGGCCAAGATGGTGGAGTGTGCCGGTGGCGGCGGTGGGGGAGGGGAGGCGCCGGTGGCGGCGTTCCAGAAGCTGTGTCCGAGGATCTGCAAGCTGCTCAACAGTCCCAATTTCATGGCCAAGGCCGCGATTTTGCCGGTGGTTGCCAGCTTGTCACAGGTTGGAGCCATTGCACCACAAAGCTTGGAACATTTGCTGCCTAGCATTCATGAATGCCTTTCTAGTACTGATTGGGCAACACGTAAAGCAGCAGCCGAGGCATTAAGTTCTTTGGCATTGCATTCAAGCAGTTTGGTTACTGATAGAGCAGCACCCACACTGGCAGTACTTGAGGCTTGCCGATTTGACAAGATAAAACCTGTAAGAGATAGCATCAATGAGGCATTGCAATTGTGGAAAAAGATTGCAGGGAAAGGAGATGGGTCTCCTGATGATTCAAAGCCCTCGTCTGATGGTGGGAATGAATCAGCTATTTCGTCAGAAGCTAGTGACCCGAAAAAAGTAAATCTTGATGAGAGGAAGACTGATTCATCAGTAAAGGATTCATCAACTAGTTCTTCAAATGTGGATTCAACCAAGGCCAAAGCAACTGGCATCTTAGAGAAGGCAGTTGTAATACTGAAAAAGAAAGCACCTGCATTAACTGATAAAGAACTAAATCCAGAATTTTTCCAAAAACTTGAAAGAAGGGGTTCAGATGATTTATCAGTGGAAGTAGTTGTTCCACGTAGAGGCCTCAATTCTTCTAACTCCAACAATGAGGAAGAATCAGAGGCAAATGCTAAAGATTCAAAAGAAAGAAGAAATTCTGTTGGAAACATCCCTAATGATGATTTTCATGGATCCTCCAGTAATAAATATCGTATCTTTGAGAGAGGCAATGATGGAAATTCCAAACAAAGGAATTATGATGATTTTGGCCATGACAGATACTCTGAAAGGAGAGTGAACTCAAAAGAACTGAGGACAAAAGCATATGGTACTGATGATAGGACTGAAAATGATCAGAGGGAGGGTTCTGCCAATCTTGCAAGTTTTTCTAAAACTGATGGTCAATCAGAAGTACCCTTCTCCAATAACAGAGGAAACTGGTTGGCCATCCAGAGGCAGTTGCTGCAACTGGAAAGGCAACAAGTTCATCTGATGAATATGCTGCAGGATTTCATGGGTGGATCTCATGATAGCATGGTGACTCTAGAGAACAGAGTGCGAGGTCTTGAGAGAATTGTTGAAGACATGTCACGAGATTTATCCATATCATCAGGTCGTAGAAACTTTACAGGGTTTGAAGGATCATCAAGTAGGCCTTCCAGCAAATATAATGGTTTTAATGACTACTCCAGTTCCAAGTATGGAAGAGGCAGTGATGGACGCATCCCATATGGTGAAAGATTTGCCCAATCTGATGGAAATGCTTTGGGAATGAGGGGAAGAGGGCCATCTTGGAGATCTGACGTGTCTGAGGGGTGGGATCTTCCTGGGTATGGTGCTTCTAGAAATGGCCAGATTTCCTCAAGGAGGGCTTTTGGTAGTAGTTCTGTCGATGGAAGATCGCCAAAATCTGTGCATGACAGTGATCAAGCAGGCAACAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTCTGGCAAGCTTCTAAGGATGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGAACATCTCGAACAGCAAGGGTAGCAATCCCTGAAATGACTGCTGAAGCTATGGCTGATGACAATGTTGGGCAAGAGAGGGATGCCATCTGGACTTCTTGGAGCAATGCAATGGATGCCCTTCAAGTAGGTGACATCGACTCAGCCTTTGCGGAAGTATTGTCCACAGGCGATGATATTTTGCTTGTAAAGCTAATGGATAGAACGGGCCCTGTAATTGAACAACTTTCAAGTCAAGTTGCATGTGAAATTGTGAATGCCATTGGACAATTCTTACTGGACCAGAACATGTACGACATCTGTTTGTCTTGGATTCAACAGTTGCTGGAGATAGTATTGGAAAATGGCCCTGATACCTTTGGCATTCCCATGGAAGTGAAGAAAGAGCTCTTGCTGAATTTACATGAAGCTTCTACAGATCCAGCTGAGGCCTGGGAAGGGGTACAGCCAGATCAGCTTTTATTCCAGTTGGCATCAGCCTGGGAAATTGATCTGCAACAGCATGACAAATAG 2565 0.4858 MILNCLYDAATDPKPAVKRDALRLLAAVCAAHSDAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKGDGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGGGGGGEAPVAAFQKLCPRICKLLNSPNFMAKAAILPVVASLSQVGAIAPQSLEHLLPSIHECLSSTDWATRKAAAEALSSLALHSSSLVTDRAAPTLAVLEACRFDKIKPVRDSINEALQLWKKIAGKGDGSPDDSKPSSDGGNESAISSEASDPKKVNLDERKTDSSVKDSSTSSSNVDSTKAKATGILEKAVVILKKKAPALTDKELNPEFFQKLERRGSDDLSVEVVVPRRGLNSSNSNNEEESEANAKDSKERRNSVGNIPNDDFHGSSSNKYRIFERGNDGNSKQRNYDDFGHDRYSERRVNSKELRTKAYGTDDRTENDQREGSANLASFSKTDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRNFTGFEGSSSRPSSKYNGFNDYSSSKYGRGSDGRIPYGERFAQSDGNALGMRGRGPSWRSDVSEGWDLPGYGASRNGQISSRRAFGSSSVDGRSPKSVHDSDQAGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTSRTARVAIPEMTAEAMADDNVGQERDAIWTSWSNAMDALQVGDIDSAFAEVLSTGDDILLVKLMDRTGPVIEQLSSQVACEIVNAIGQFLLDQNMYDICLSWIQQLLEIVLENGPDTFGIPMEVKKELLLNLHEASTDPAEAWEGVQPDQLLFQLASAWEIDLQQHDK 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00940 854 Gene3D - 76 232 IPR011989 -
Pumo1g00940 854 Gene3D - 1 75 IPR011989 -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 368 385 - -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 387 403 - -
Pumo1g00940 854 SUPERFAMILY ARM repeat 2 263 IPR016024 -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 610 630 - -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 248 305 - -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 350 451 - -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 277 291 - -
Pumo1g00940 854 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 1 822 IPR033337 GO:0005874|GO:0008017
Pumo1g00940 854 MobiDBLite consensus disorder prediction 404 449 - -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 259 275 - -
Pumo1g00940 854 Coils Coil 508 528 - -
Pumo1g00940 854 MobiDBLite consensus disorder prediction 576 651 - -
Pumo1g00940 854 SMART TOG_3 1 236 IPR034085 -
Pumo1g00940 854 FunFam Microtubule-associated protein TORTIFOLIA1 76 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00940 Pumo-Chr1 14503492 14510294 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00940 - - gmx:100804845 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00940 1 14503492 14510294 Pumo1g00940 1 14503492 14510294 ECH