Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00926 ATGAGAGAGGGGACACTCCTTTGCACCTTGCAGCTTCAAGAGGGTTCAATGGTATGTGCAAGTGCATCATTGGGGAGTTTGAAGGAGAGGAAGGATTTGGTTAAGGTTAGGAACAATAAGGGTGAAACACCTATCTTCAGGGCTGTGCTCACATGCCAAACAAGTACCTTTGTGTACCTCAATCATGTTTCCAAGGATTTAGATGTTCCACTTAGGAACAATGATGGCGATACCATCCTTCACCATGCCATTTGGAGAGAATTATTGGATTTGGCTATTATAATAACTCATTGCTATCCTGGACTTGTGGACACACGAAACAAAGACGGAGCCACTCCTCTCAAAGTTCTTGCCAGTAAGCCTTCGGCCTTCAAGAGTGGAAGCAATCTCCCATGGTGGAAGCAAATTCTATATTATGGTATACTCGTAGAACCTCTAGACGCTGAAAAAGCAATAAAATCCTATATGGATAAAGTTGAAAAATTTGAGGACCATGAACTCAAAGTTAATGTACAGTATAAAAGTGAAGCCAATAAAGCACAAATTTTTGTGGAAAAACAATATGCCACTTCTGTTCGGTTTCTAAAGAAAGCTGTTCGAGTAGCATTCAAAGTCCTTAGCCTCTCAGGATTGGGTGTCACTACACAGGACTTGAAAGCAATAAAGAAGATCAGGCAGAAGCACAGATGGGGTCGTCAACTCTTGAATATTTTTATGGCAAGACCTTATGAGTCGTACATGGGAATCACTGGGGGTCAACCATTTGTGAAATTTGGAGAAGACAGAGACTTGGCACAATCCGTTATTACCCAACAGCAGTTACAAATGGTGGGTGGTGCAGCTAGCTCAGGTCCACAAGAAAATAGTAGAATGGAACCTGCGGCAAAAAATGAGGAAAAGGAGACAACATTTGTGACAGTGGCAAAAGCCGGCATAGTTGAACTTGTGAACGAGCTTCACAACAAAGTACCAGGTACCCTCCATGACACTACCGCCACCCCTGAGAAGGAAAACCTGCTGGTTGTGGCAATGAAGAACATCAAATACAAATCAGGAGAACACCATGTTGACAAAAAGGAGACTGCGTTTTTGGCGGCGGCAAAAAATGGCATTGAGGAGATTGTGTCTGAACTTCTATCCAAAATACCGAGTGCCGTGCATGAAACCAACTCCAACAATGAGAACGTGTTGCTTGTGGCTGTGAAGAATAGGCAAACCAAAGTTGTTGAGGTGTTAAGGAAGAGTTTGGATAAGGAACTCTTTGATAGCTTGATTTTGGAAGTGGATAACAGGGAGAACACTGTGTTGCACTTGGCAGCAGGTACTACAAGCAACAGTGAAAGGACTTGGCAGATTGCTGGTTCTGCCATGCAAATGATGTGGGATATCAAGTGGTATCAGTACATTAAAGGCCTAGTGCCGGAGCATTTCGCTTTCAGAACCAACAAAGACGACAAAACCGCAGGCGAAATCTTCAAACAAAAACACAAGGACCTCGTGAAAGAAAGCTCCGAGTGGCTGAAGGAAACCTCCAACTCCTGCTCCGTCGTCGCCGCCCTAATCGCGGGCGTCTCCTTCGCCACATCGAGCTCCGTCCCCGGCGGCACCGACAAGGGCAAGCCCGAGCTCGAAGGCCAGCCCGCCTTCGACGCGTTCGCCATCGCCTCGCTCATCGGCCTCTGCTTCTCCGTCACCGGCGCTCATCATGTTCCTCGCCATCCTCACCTCCCGAAAACAAGCCCAAGACTTCCGCAAGAGCTTGCCCCTGAAGCTTCTCTTTGGCCTCAGCTCTCTCTTCGTGTCCATTGGCTCCATGCTCGTCTCGTTCTGCGCTGCGCATTTCTTCGTGCTCAAGGACAAGTACAAGAACATTCTGTTCCCAGTTTATATTGCTACTTGCTTGCCTGTTACTTTCTATGCGGTGGTGCAGTTTCCGCTGTATGCTGA 1947 0.4664 MREGTLLCTLQLQEGSMVCASASLGSLKERKDLVKVRNNKGETPIFRAVLTCQTSTFVYLNHVSKDLDVPLRNNDGDTILHHAIWRELLDLAIIITHCYPGLVDTRNKDGATPLKVLASKPSAFKSGSNLPWWKQILYYGILVEPLDAEKAIKSYMDKVEKFEDHELKVNVQYKSEANKAQIFVEKQYATSVRFLKKAVRVAFKVLSLSGLGVTTQDLKAIKKIRQKHRWGRQLLNIFMARPYESYMGITGGQPFVKFGEDRDLAQSVITQQQLQMVGGAASSGPQENSRMEPAAKNEEKETTFVTVAKAGIVELVNELHNKVPGTLHDTTATPEKENLLVVAMKNIKYKSGEHHVDKKETAFLAAAKNGIEEIVSELLSKIPSAVHETNSNNENVLLVAVKNRQTKVVEVLRKSLDKELFDSLILEVDNRENTVLHLAAGTTSNSERTWQIAGSAMQMMWDIKWYQYIKGLVPEHFAFRTNKDDKTAGEIFKQKHKDLVKESSEWLKETSNSCSVVAALIAGVSFATSSSVPGGTDKGKPELEGQPAFDAFAIASLIGLCFSVTGAHHVPRHPHLPKTSPRLPQELAPEASLWPQLSLRVHWLHARLVLRCAFLRAQGQVQEHSVPSLYCYLLACYFLCGGAVSAVC 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00926 648 Gene3D - 3 199 IPR036770 -
Pumo1g00926 648 MobiDBLite consensus disorder prediction 276 290 - -
Pumo1g00926 648 MobiDBLite consensus disorder prediction 276 300 - -
Pumo1g00926 648 SUPERFAMILY Ankyrin repeat 29 440 IPR036770 -
Pumo1g00926 648 FunFam Uncharacterized protein 341 501 - -
Pumo1g00926 648 Gene3D - 267 500 IPR036770 -
Pumo1g00926 648 Pfam Domain of unknown function 505 565 IPR026961 -
Pumo1g00926 648 PANTHER CASKIN 38 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00926 Pumo-Chr1 14006410 14017153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00926 302 564 Miscellaneous Gene Families AT3G12360 26.174 3.03e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00926 - - gmx:100813041 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00926 1 14006410 14017153 Pumo1g00926 1 14006410 14017153 ECH