Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00920 ATGAGAAGAAGGCCAGGAATTGGAGGTTTGCAGACGCATGCTGCTGCAAGGGATCAATTTCGTTTGTTGGGTGAAAATGTCGCAAAGATCAGAACCGATTTGATGAAGGAGCAGCTTGCCACCTTTCGCTCTCAGCTCGAAGATTTCGCTCGCAAACACAAGAATGACATCCGCAAGAACCCTGCATTCAGATCCCAGTTTCATGAGATGTGTGCTAAAGTTGGAGTAGACCCCTTGGCCTCTAACAAGGGTTTCTGGTCAGAGCTGTTAGGACTTGGTGACTTCTATTATGAACTCGGAGTTCAAATAGTGGATATTTGCTTGGCCACTAGAGCCCACAATGGAGGACTGATTGACCTGCAGGAACTCTGCCATCTTCTTCGCCAGAGACGAAAAAGTGATCGTGGAGTTGTTTCTGAGGATGATTGCTTGCGTGCTATTAAGAAGCTTAAGGTTATGGGTAGTGGTTTTGAAGTTATTTCTGTTGGAAAGAAAAAACTTGTTCGTTCAGTTCCAACTGAGTTGAACAAAGACCACAATGAAATTCTAGAACTTGCCCAGGCTCAAGGATTTGTGACTGTAGATGAAGTAGAGAGGCGATTATCATGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGACGAAGGACTTGCAATGATTGATGATGGCCATAGAGATGGTAGACGGCGGTACTGGTTTCCTTGTGTGTCTCCCATCTCATCTTCAATAGGAGTTGATTCCTAA 753 0.4515 MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWSELLGLGDFYYELGVQIVDICLATRAHNGGLIDLQELCHLLRQRRKSDRGVVSEDDCLRAIKKLKVMGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQAQGFVTVDEVERRLSWSSGRAIDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSPISSSIGVDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00920 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Pumo1g00920 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Pumo1g00920 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
Pumo1g00920 250 FunFam Vacuolar-sorting protein SNF8 91 171 - -
Pumo1g00920 250 PIRSF ESCRT2_Vps22 1 245 IPR016689 GO:0000814|GO:0071985
Pumo1g00920 250 Gene3D - 24 85 - -
Pumo1g00920 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 240 IPR016689 GO:0000814|GO:0071985
Pumo1g00920 250 FunFam Vacuolar protein sorting-associated protein 172 250 - -
Pumo1g00920 250 Gene3D - 91 171 IPR036388 -
Pumo1g00920 250 Gene3D - 172 248 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00920 K12188 - gmx:100781799 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00920 1 13967778 13972840 Pumo1g00920 1 13967778 13972840 ECH