Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00913 ATGGGTTGCAGAAACAGGGACTCAATCACAGAGAATCACACTTCATCGTCTTCTTCTGATTCACTCAGCGAAGCCTTGCTTTTCACCACCATGTGCATCGTTGGCCTCCCCGTCGATGTTCACGTTAAGGATGGCTCTGTCTATTCTGGAATCTTCCACACTGCTTCTGTTCACGCCGATTACGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAAGGGAAAGGGCAACACCAATGTCGGAAATGAGGGCTTCGTGGATACGCTAGTGATTCTATCCGGTGATCTTGTGCAAGTTGTTGCTAAGGGAGTAATGCTTCCTGCAGATGGTGTTGGCGGAAACATAACTGGTGATGATAAGGAAGCAGTTGCGCATAATGTGTGTTCTGAGAGTCTAATGTGTGAGGTAGAGAATCATACAGGGCCTTTGGTTGATGCAAAACAGGTTAATCAATTAAGACAAGCTGGAGACAATAAGTCAAACTCAAAAGGGAAAGCTGATGACTGCAGAAAGAAGTCTGAGTTAGTTAATGAAAAAATTCAGGGTGAAAAGATTCAAAGCCTCGATTCAAGCCATGAAATCAATACATGTCGAGGCCAAGAGGTAGCTGTTGAGCATGGAAGCACAGATAGGACATCAAGTCCTTCTGATAATGGATTATTCTGCAACAATGCCCCTGCATCTGTTAAGGCCGATGATCGGAATAGTGAAAGATCTACTTCTGCAGAGTCTGTCTCTACAAATTCAACCCAAGGTGTGGATCTCATCTCAGAGTCACATCCAGCAAGGACCATTGAAGTATCTGCTCCAAGGGGTGCAGATTCTACCAGAAATGCTAAGGAATTTAAGCTCAATCCAGCTGCCAAAACCTTCTCTCCATCTTTTGTGAATCCTATATCAGCAACTTCTGCTGCAAACATGGTATACATACCAAATAGCTCTCCTGCAGTACCTGCTGCTAGTATTCAACCTGAAGTTGGATTCAATACTTTTGCTTCTCGGCCATCAGTGCCTGTTAAGGTCGCACAGTATGGTAATTTGACAGTGGGAAATGGTGGCAGTGGCTCTCAGTTTTCACAACCTATTGTTGGACATGTGGCACATAGAACCCAACCTCTACGGTATGCTACACATTACACTCCTGTGTTGTCTGAACCTGCTTATATGCAACCAAGCTCTCCTGCTGTTATGGTCGGACGTTCCCCCCAGTTAGTTTATGTTCAGCCAGTTTCCCATGATTTGATTCATGGAACTACGGCTGTCCCACCAGTCTCAGCTCGCCCTCTGTTGAATCATGTACAATTTCCAAAGCAGCAGGGAGGAACAATTGGTCCAGCAATGCCAGTTTGTGTGCCCCCTCCTGTCCTAACAAGTGGACATCAGCCCTTTGCACTTCAAAGCCACATTCCACTTCTGCAACCTGGCTTTCCTGTCACTCGACCTGTTTCAGTCCCAGGACCAAATGGTTTCTATGGCACTAAGTTTTAG 1488 0.4543 MGCRNRDSITENHTSSSSSDSLSEALLFTTMCIVGLPVDVHVKDGSVYSGIFHTASVHADYGIVLKKARMTKKGKGNTNVGNEGFVDTLVILSGDLVQVVAKGVMLPADGVGGNITGDDKEAVAHNVCSESLMCEVENHTGPLVDAKQVNQLRQAGDNKSNSKGKADDCRKKSELVNEKIQGEKIQSLDSSHEINTCRGQEVAVEHGSTDRTSSPSDNGLFCNNAPASVKADDRNSERSTSAESVSTNSTQGVDLISESHPARTIEVSAPRGADSTRNAKEFKLNPAAKTFSPSFVNPISATSAANMVYIPNSSPAVPAASIQPEVGFNTFASRPSVPVKVAQYGNLTVGNGGSGSQFSQPIVGHVAHRTQPLRYATHYTPVLSEPAYMQPSSPAVMVGRSPQLVYVQPVSHDLIHGTTAVPPVSARPLLNHVQFPKQQGGTIGPAMPVCVPPPVLTSGHQPFALQSHIPLLQPGFPVTRPVSVPGPNGFYGTKF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00913 495 MobiDBLite consensus disorder prediction 153 175 - -
Pumo1g00913 495 MobiDBLite consensus disorder prediction 160 175 - -
Pumo1g00913 495 PANTHER ATAXIN 2-RELATED 153 445 IPR045117 GO:0003723
Pumo1g00913 495 MobiDBLite consensus disorder prediction 202 277 - -
Pumo1g00913 495 Pfam Ataxin 2 SM domain 24 102 IPR025852 -
Pumo1g00913 495 MobiDBLite consensus disorder prediction 206 223 - -
Pumo1g00913 495 MobiDBLite consensus disorder prediction 240 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00913 Pumo-Chr1 13690682 13699045 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00913 - - gmx:100794683 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00913 1 13690682 13699045 Pumo1g00913 1 13690682 13699045 ECH