Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00887 ATGGAGGATAAGTATAGTCTAAACAGGCAGAGGAGTGGAATATGGAATTGTTTGAGAGATGGAGACTTTGAAGAAGAAGACGTTTGGGCTGTTTTCAAGGACAGACCTGATTACATTTCTGGAGTTCACAAGCCAAAGGTAAAAGGGTCTCCTCCTCTTGCTGTCCCTAGGACTCTCCCAAGTGCAGCAAGGATGATCCCAAGGACTAGTAGTGGCAATAGTAGTGCTAGTTCCTCCCATGAAACCAAGGTTCTTCAGCAATCAGCACCTCTCAACATTCCTGACTGGTCAGAGATTTATAGGAACAAGCCAAACAAGACCCCCAAGAGTGTTTCAAGGTTTGGTGACTATGATGATTTCTATCATTCTGTTGATCATGAAGGTGATGGTGATGGTGTTGGTGTTGTCAATTATGGTGGAGGGTATAGTGATGATGAAGAACAGGAAGAGGATGAATATGATACAAAGCTCCCCCCACATGAGTTTATTGCAAGAAGGCTTGCAAGGAGTCAGATATCCTCATTTTCAGTTTTTGAAGGTGTTGGAAGGACCCTCAAGGGAAGGGATCTTAGCAAAGTGAGGAATGCTGTTCTCACAAAAACTGGTTTCCTTGAATCATTGTAA 624 0.4327 MEDKYSLNRQRSGIWNCLRDGDFEEEDVWAVFKDRPDYISGVHKPKVKGSPPLAVPRTLPSAARMIPRTSSGNSSASSSHETKVLQQSAPLNIPDWSEIYRNKPNKTPKSVSRFGDYDDFYHSVDHEGDGDGVGVVNYGGGYSDDEEQEEDEYDTKLPPHEFIARRLARSQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00887 207 MobiDBLite consensus disorder prediction 41 88 - -
Pumo1g00887 207 Pfam Senescence regulator 22 205 IPR007608 -
Pumo1g00887 207 MobiDBLite consensus disorder prediction 64 88 - -
Pumo1g00887 207 PANTHER EXPRESSED PROTEIN 18 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00887 Pumo-Chr1 13474917 13476817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00887 - - gmx:100788195 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00887 1 13474917 13476817 Pumo9g01890 9 48056970 48058573 ECH
Pumo1g00887 1 13474917 13476817 Pumo1g00887 1 13474917 13476817 ECH
Pumo1g00887 1 13474917 13476817 Pumo9g01890 9 48056970 48058573 PCT