Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00868 ATGGAGGTGTTAAGCAAAACTGGAATGGATGAAGCACTATGTTCATATATTGAAAAGGATCGCCCATTTTTGGGCATTTGTCTTGGACTTCAACTGCTCTTTGAATCTAGCGAGGAGAATGGACCAGTAAAAGGTCTTGGCTTAATACCTGGAACTGTTGGGCGATTTGACTCATCAAATGGTTTTAGAGTACCACATATTGGCTGGAATGCTTTACAAATCACGAAGGACTCGGGAATTTTGGATGATGTTGGAAATCACCATGTCTATTTTGTGCACTCTTATCGTGCCGTGCCTTCAGATGACAACAATGAGTGGATATCCTCCACCTGTGACTACGGTGACAAATTTATAGCATCTATTAGAAGAGGAAATGTGCATGCAGTTCAATTCCACCCAGAGAAGAGTGGAGATGTTGGTCTCTCTATTTTGAGAAGATTCTTGAATCCGAAGTCAAACATGGCAAAGAAGCCTGGGGAAGGCAAAGCTTCAAAACTTGCAAAAAGGGTGATTGCTTGTCTTGATGTGAGAACGAATGATACGGGGGACCTTGTTGTAACCAAAGGAGACCAGTATGATGTAAGAGAACATACAAAAGAGAATGAGGTAAGGAATCTTGGCAAGCCAGTTGATCTTGCAGGACAGTACTATAAAGATGGAGCTGATGAGGTCAGCTTTCTAAACATTACTGGATTTCGCGACTTCCCTCTTGGTGATTTACCGATGCTGCAGGTATTGCGATACACATCAGAAAATGTTTTTGTACCCTTAACAGTTGGGGGAGGAATTAGAGATTTCACAGATTCAACTGGAAGGTACTATTCTAGTTTGGAAGTTGCTTCAGAATACTTTAGGTCTGGGGCTGATAAGATTTCCATCGGAAGTGATGCAGTTTATGCTGCAGAGGAATATTTAAGAACTGGAGTAAAGACTGGGAAGACCAGCTTGGAGCAGATATCAAGAGTTTATGGGAATCAGGCAGTGGTGGTTAGTATTGATCCCCGTAGAGTGTACATAAAGGATCCTAAGGATGTGCAATTAAAGACCATAAGGGTTTCAAGTCTAGGTGAATTATCTTTTATGGCTCTTCCTTTATTTTACTCTAATATATATGTGGAACATTTTCTTTTCCTTTATTTTATATTTTATGGCTCTGAATTATCTAAATTTTACTCTAATATATGTGGAACATTTCTCTTTGGTCAAATATGCAAGAGATAG 1221 0.398 MEVLSKTGMDEALCSYIEKDRPFLGICLGLQLLFESSEENGPVKGLGLIPGTVGRFDSSNGFRVPHIGWNALQITKDSGILDDVGNHHVYFVHSYRAVPSDDNNEWISSTCDYGDKFIASIRRGNVHAVQFHPEKSGDVGLSILRRFLNPKSNMAKKPGEGKASKLAKRVIACLDVRTNDTGDLVVTKGDQYDVREHTKENEVRNLGKPVDLAGQYYKDGADEVSFLNITGFRDFPLGDLPMLQVLRYTSENVFVPLTVGGGIRDFTDSTGRYYSSLEVASEYFRSGADKISIGSDAVYAAEEYLRTGVKTGKTSLEQISRVYGNQAVVVSIDPRRVYIKDPKDVQLKTIRVSSLGELSFMALPLFYSNIYVEHFLFLYFIFYGSELSKFYSNICGTFLFGQICKR 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00868 406 Gene3D - 1 170 IPR029062 -
Pumo1g00868 406 FunFam Imidazole glycerol phosphate synthase hisHF chloroplastic 1 157 - -
Pumo1g00868 406 Gene3D Aldolase class I 171 363 IPR013785 -
Pumo1g00868 406 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1 157 - -
Pumo1g00868 406 SUPERFAMILY Ribulose-phoshate binding barrel 165 338 IPR011060 -
Pumo1g00868 406 NCBIfam imidazole glycerol phosphate synthase subunit HisH 1 148 IPR010139 GO:0000105|GO:0016763
Pumo1g00868 406 Pfam Glutamine amidotransferase class-I 8 147 IPR017926 -
Pumo1g00868 406 CDD GATase1_IGP_Synthase 1 148 IPR010139 GO:0000105|GO:0016763
Pumo1g00868 406 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISH 1 154 IPR010139 GO:0000105|GO:0016763
Pumo1g00868 406 SUPERFAMILY Class I glutamine amidotransferase-like 3 149 IPR029062 -
Pumo1g00868 406 Pfam Histidine biosynthesis protein 169 345 IPR006062 GO:0000105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00868 K01663 - gmx:100500353 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00868 1 13199367 13211661 Pumo1g00868 1 13199367 13211661 ECH