Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00834 ATGGCATCAAACCAGATCCTGAAAGAACTACAATGGGCTCAGCAAGCTATCAAATCTGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTCTCCCAACCAACTTCAGGTTGTTATCAAGAAACAGACAACTCCATAAGCATAAACATTTCCAAGGAAAACCTTCCATTCTTTTCCCACCTCTTGACAACACTAGCAGCACCTAGGAGCCCCAACTCCTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAACAGGTAAGAAATCTTGGCATCTTGCTTGGGAATAACCAAAATGTACAACAAGTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGCCTATCAGACCTTTCTGACATTCTGAAGGCAAATAAAGTGATAAAAGAGATCATGCTTTCAGAATCAGGTATAGGGTCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTGTGGTGAATGACAGTTTGGAGGAGCTGCAGATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCCAAGATGATTGAAGTTAACTCAACTCTTAAACTTTTGACAATTTTTGACTCAAATGCCATCACAGCTACCCCTCTTATATCTGCAGTTTTGGCAAGGAACAGAAGAATGGAAGTTCATGTTTGGAGTGGAGAAAATGGGGAAAGAAGTTCCAAGGTGGTTGAGTTTGTACCTGAGAACAGCACACTTAGAATTTACAAGCTTAACCTCTCAGGTGCTTGTAGGGTTACTTGCTCTTTAGGGATGAACTTCACCGTGAAGTCGCTTGACATGACCGGCGTCAAGCTAAAGTCACGGTGTGCTAAGGAATTTAGGTGGGTTTTGGAACAAAACCAGACCCTCAAAGAGGTTAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGCCTCTTTAAGAACAGAAGTCTGCAAACCTTACATCTAAGTGGAAATTGGTTCAGTGGAATAGGTGTGGAGCATCTACTATGCCCTTTGAGTAGATTTTCAGCACTGCAAATGCAAGCCAACACTACTTTGACATGTGTTACTTTTGGAGGAGGGAGAACAAGAATAGGAAGGGATGGCCTAGCTGCTATTATACAGTTTCTTATAACCAATGAAACAGTGAGGAAGTTAGGGATTCATGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTACAAGGCTGCAAGCGTGTGGAGGGAGAGACATTGCTGCAGACAATGATGGAGACACTACAGATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACACAACTCTGGAAAGACTCAGGCGATTTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGAAATGGATTTGGTCAAGGACATGCCGCTAACAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGCAAAACCACACTTTGTCATTCAATATCACAAAATTTCTCTGCTTCATCACTTCCCTACTTGGATCAAGTCAGAACAATTGTGAACCCAGTGGAGCAGGCTGTCAAGACAGTAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAAGGATTTCAATATGGAATCTTGCTGGTCAGCATGAGTTTTTATCCCTCCATGATCTTATGTTCCCAGGTCACGGGAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCAAAAAGCTCAACTGAAATTGAAGAGGACCTGCAATATTGGCTTAGGTTCATAGTTTCCAACTCTAAAAGGGCAATACAACAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACTTTGATAAAATCAACCAACCATCACAAAATTTGCAGCACACAGTAGATTCAATTCAGAGATTGAGAGACAAGTTCCAAGGCTATGTTGAATTCTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCGCGAGTTTATCAACTTTGCAACGATCTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAACTTAAAGTCCCGTCGTTGAGAATTCGATCAAGACATGATAATAAAGAGAAGGTGGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGTGAGGTGATTTACTTTGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGCACTTGGTCAGCTCATAAAGTTGAATGTTAGGAAGCAACACTCCTCAGAAAACAATGGATTTATTAGCAGGAAGGAACTGGAAAAAATCTTAAGAGGAAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCAAAGGTGTTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTTTGTTATGAGCAAGATCCATCAGATCCAAATTCTCTGCTATTGATTCCCTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAGGTGGCAGCTAAGCATGCCAGACTGTGTTTATGCGGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTACAGGTGCACCTTCACAACAGAATAAAGGCTCTAAGGGATCAACATGGGGCAACTTACAGTCTTGAGAAGTACCTCATTTCAATCAGCATTAATGGAATCAACGTAAGAGTAGAACTTGGAGGACAGTTGGGTTACTATATTGATGTCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGGGTCATAAATCAACTTATAATCCCTGCAATCCAAAGCGTTTGCCATGGGATCACCTTGACTGAAAATGTCATAAGACCTGAATGTGTGAGAAAATTGACACCACCTAGATACAGAAAAACTCAATTTGCTTCCCTGCAGCTACTGAAACAAGCACTACTTTCACTTCCAGCAGACAGCATGTATGATTATCAACACACATGGAGTCCAGTACTAGACTCTGGTAGGCCTATTCTCGAAGATGGATTTGATTTTGCACGAGACCTTTTATCCGATGATGATTTCCGAGAAGTGTTGCATCGAAGGTATCACGACCTATACAATCTTGCACAAGAGCTGCAAGTCCCACCTGAAAATAACCCTGAAGGGCAAGGTCAATTAACCTTAAGTGATGAAGCTGCAAAGGTTGAACCAACCTTTGGTGGCATTGCAAAAGGGGTTGAAGCAGTTTTACAAAGACTCAAGATTATTGAACAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATACTATGAACATAGACTTCTCCTTGAGCTTCATCGCAAAGTGAACCACCTAGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATTTATTTTGTGAAGACAGACAACTACACAAGGAGACTAGTCACCACCATGCTTTCTGGCATGAATGCTCTCCGGCTTCATATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTGGAAGATCAGATGGGGTGTGAAATCATGCAAGTCGACAACGTGGCTGTGAAGTCTTTGGCTCCATACATGAAGAAGTTCATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGGATGGGGCAAATGATACCAGACTTGAGCAAGGAGGTGGCTCATTTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGGGCAACTGCAGCTGGTGTTGTAGGGGTGGCCGCTATGGGTCGCAGAAACAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTAAGGGAAAGGAGGTGCTCCTCAGGGAAGGATATTGCAGAGAAATTTGGACTGTGGCGAGTAAGGTATAGGGACAATGGTCAAATTGCATGGATATGCAGGAGGCACATGTATGCCAGATCTGCAGAGATAATTGAAGTGCCTGTTTGA 4131 0.4246 MASNQILKELQWAQQAIKSEGLNLHSISFYLSQPTSGCYQETDNSISINISKENLPFFSHLLTTLAAPRSPNSSLRNLEFHRVEWDSQQVRNLGILLGNNQNVQQVVFRRNRFNGKSLSDLSDILKANKVIKEIMLSESGIGSVGAGLIASALVVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRRMEVHVWSGENGERSSKVVEFVPENSTLRIYKLNLSGACRVTCSLGMNFTVKSLDMTGVKLKSRCAKEFRWVLEQNQTLKEVNLSRTCLKDKGIVYVAAGLFKNRSLQTLHLSGNWFSGIGVEHLLCPLSRFSALQMQANTTLTCVTFGGGRTRIGRDGLAAIIQFLITNETVRKLGIHDDESLRSDDFVKIFKSLEKNASLKCLSLQGCKRVEGETLLQTMMETLQINPWIEDIDLSRTPLHNSGKTQAIYQRLGQNEKTEPEMDLVKDMPLTEPKSCRVFFCGQECAGKTTLCHSISQNFSASSLPYLDQVRTIVNPVEQAVKTVGMKIKTFKDEDTRISIWNLAGQHEFLSLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHFDKINQPSQNLQHTVDSIQRLRDKFQGYVEFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQLKVPSLRIRSRHDNKEKVEMKRRAIATCLHHIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRKQHSSENNGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIKALRDQHGATYSLEKYLISISINGINVRVELGGQLGYYIDVLACSTKNLTETLRVINQLIIPAIQSVCHGITLTENVIRPECVRKLTPPRYRKTQFASLQLLKQALLSLPADSMYDYQHTWSPVLDSGRPILEDGFDFARDLLSDDDFREVLHRRYHDLYNLAQELQVPPENNPEGQGQLTLSDEAAKVEPTFGGIAKGVEAVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVKTDNYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQMGCEIMQVDNVAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLCGAAGATAAGVVGVAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERRCSSGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIIEVPV 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00834 1376 Gene3D Ribonuclease Inhibitor 236 346 IPR032675 -
Pumo1g00834 1376 Gene3D Ribonuclease Inhibitor 49 217 IPR032675 -
Pumo1g00834 1376 Gene3D Ribonuclease Inhibitor 347 478 IPR032675 -
Pumo1g00834 1376 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Pumo1g00834 1376 Pfam Leucine Rich repeat 287 308 IPR001611 GO:0005515
Pumo1g00834 1376 Gene3D - 490 694 IPR027417 -
Pumo1g00834 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 691 IPR027417 -
Pumo1g00834 1376 PANTHER PROTEIN TORNADO 1 1 1375 - -
Pumo1g00834 1376 Pfam Ras of Complex, Roc, domain of DAPkinase 492 619 - -
Pumo1g00834 1376 SUPERFAMILY RNI-like 21 471 - -
Pumo1g00834 1376 Coils Coil 1123 1150 - -
Pumo1g00834 1376 SMART LRR_RI_2 156 183 - -
Pumo1g00834 1376 SMART LRR_RI_2 316 343 - -
Pumo1g00834 1376 SMART LRR_RI_2 288 315 - -
Pumo1g00834 1376 SMART LRR_RI_2 128 155 - -
Pumo1g00834 1376 Pfam C-terminal of Roc, COR, domain 755 924 IPR032171 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00834 - - gmx:100784182 2593.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00834 1 12673472 12679184 Pumo1g00834 1 12673472 12679184 ECH