Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00793 ATGAACGTGGGCGACCTCAACAAGGTGTGGGAAATCAGAGCTCTGAAGCGGAAACCCGCGGCAGAACAAGCCACGAAGATGCTGGAGAAGATCGCCAAACAGGTCCAACCCATTATGCGCAAACACAAATGGAGGGTCAAACTTCTCTCTGAAATGTGCCCGAGCAATCCGTCTCTTCTGGGGTTGAATGTTGGAGCTGGTATACATGTGAAGTTGCGGCTACGGAGACCGAACAGGGATTCCGACTTTTACCCGTTTGATCAGGTTCTGGATACGATGCTTCATGAGCTTTGCCATAATGCCCATGGCCCTCATAATGCCAACTTCTACAAGCTCTGGGATGAACTTAGAAAGGAATGTGAAGAGTTGATGGTTAAGGGAATAACTGGCGCAGGGGAGGGGTTTGATCTTCCAGGAAGGCGTTTAGGTGGTTATTCCCGGCAACCTCCACTTTCATCCCTCCGTAAAACTGCACTGGCAGCTGCAGAAAAGAGAGCACAATTGGAATCTCTTCTTCCATCTGGACCAAAACGTCTAGGTGGTGATAGTGTTATAATGAAGGCCCTTAGTCCAGTACAAGCTGCTGCAATGGCTGCAGAACGGAGATTACAGGATGACATATGGTGTGGTTCTCAATCTTGTGAACACTTGGATCACGAAGATGTTGATTATGAAGTTGCTGAGAACATTGTGCATAAGGGGGAAAATGTGGGAAGCTTAAAACAAAAAGACAATTCTACTCTACCTTCGAATCTGTTATCTCGAAAAAGAAGTCAGGATACCGATTCAAGTTTACCTGTTAACTCATCATCTAGTACTCCTGTATTTGTAGATTTGACTATGGATACACCGAAAATTAGACCAGTCACGGAGCATCAAACTGGACCTAAACGAAGATGCGGTGGATCAGAAAGCATTTCACATTCTCAATCCAATTATCAGGCAGGATCTAGTTCAGCAAATTTATCAAGTGTGTCTGGGCAACATTGTGAAGAATCTGGAATGTGGGAGTGTACGGTGTGCACTCTGTTGAATAAAAGATTGGCTCCCATATGTGAGTTGTGTGGCACTCAGCAGCCAAAAGATGTTAGTACCAAATACAACACTTGGTCTTGTAAATTCTGTACGTTGGAAAACAATGTGAAGTTGGAGAAGTGCTCAGCCTGTGATCAGTGGAGATACTCTCATGGCCCATCAGTGTCAATCCGGGCACCCAACCTTGGTACATAG 1230 0.4545 MNVGDLNKVWEIRALKRKPAAEQATKMLEKIAKQVQPIMRKHKWRVKLLSEMCPSNPSLLGLNVGAGIHVKLRLRRPNRDSDFYPFDQVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMVKGITGAGEGFDLPGRRLGGYSRQPPLSSLRKTALAAAEKRAQLESLLPSGPKRLGGDSVIMKALSPVQAAAMAAERRLQDDIWCGSQSCEHLDHEDVDYEVAENIVHKGENVGSLKQKDNSTLPSNLLSRKRSQDTDSSLPVNSSSSTPVFVDLTMDTPKIRPVTEHQTGPKRRCGGSESISHSQSNYQAGSSSANLSSVSGQHCEESGMWECTVCTLLNKRLAPICELCGTQQPKDVSTKYNTWSCKFCTLENNVKLEKCSACDQWRYSHGPSVSIRAPNLGT 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00793 409 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 1 408 - -
Pumo1g00793 409 SUPERFAMILY Ran binding protein zinc finger-like 332 359 IPR036443 -
Pumo1g00793 409 Pfam WLM domain 8 204 IPR013536 -
Pumo1g00793 409 SMART zf_4 368 392 IPR001876 -
Pumo1g00793 409 SMART zf_4 334 358 IPR001876 -
Pumo1g00793 409 MobiDBLite consensus disorder prediction 240 278 - -
Pumo1g00793 409 Pfam Zn-finger in Ran binding protein and others 333 360 IPR001876 -
Pumo1g00793 409 ProSiteProfiles WLM domain profile. 1 204 IPR013536 -
Pumo1g00793 409 Gene3D - 329 368 - -
Pumo1g00793 409 MobiDBLite consensus disorder prediction 303 318 - -
Pumo1g00793 409 ProSiteProfiles Zinc finger RanBP2 type profile. 332 361 IPR001876 -
Pumo1g00793 409 ProSiteProfiles Zinc finger RanBP2 type profile. 366 395 IPR001876 -
Pumo1g00793 409 MobiDBLite consensus disorder prediction 235 318 - -
Pumo1g00793 409 ProSitePatterns Zinc finger RanBP2-type signature. 336 355 IPR001876 -
Pumo1g00793 409 ProSitePatterns Zinc finger RanBP2-type signature. 370 389 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00793 Pumo-Chr1 12005888 12009037 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00793 K22685 - gmx:100795976 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00793 1 12005888 12009037 Pumo1g00793 1 12005888 12009037 ECH