Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00782 ATGAAAAGGAGAAAAAAGAAGTGGCGATGGAGGAGGAGGATGAAGATGTGGATAAGGATAATATTGATAAGTCAAAAGAAGAAGAAGGCAGAAGATAGTAAGGGTGAGAAAGGATCAAAAAAACGTGTGAGAGGGAAGATCAATGGGGAGAAAGTGAAAGGGAAAAGAAAGGAAGTGAAGAAAACAGAGCCAAGGACTCCTACTATTGATCGCCCTGTGCGGGAAAGGAAATCAGTTGAGAGGTTGGTAGCATCAATTGAGAAAGATGCAACAAAAGAATTTCACATTGAAAAGGGTCGTGGTACGCCTTTAAAAGATATACCAAATGTGGCATTTAAGTTATCTAGAAGGAAGACTGATGATACTTTCAAATTGCTCCATACAATCCTCTTTGGAAGGAGAGGGAAGGCAATTCAGATCAAGAGTAATATATCAAGGTTTTCTGGTTTTGTGTGGCGTGACAATGAGGAAAAGCAGATGATTAAAGTGAAAGAAAAACTTGACAAGTGTAATAAAGAGAAGTTACTGGAATTCTGTGATGTGCTTGACATATCAATTAACAAGGCAACAACGAGGAAGGAAGATATTATTGCTAAGCTTGTAGACTTTTTAGTTGCCCCTCATGCAACCACAACTGTGTTACTTGCAGAAAAAGAGAAGCCCAGTAAGGGAACAAAGCGCAAGCGTGTTGTAAAACGGGGTTCATCAAGATCTGGGACAACTTCAAGACGTTCTGCGAAGAGTCAGAAGAAAAATGAAGATTCTTCAGTAGTGCGGAGAATGAGTGCAACTGACACAGAAGATGAATCAGAAGAAGACGAGAAAGATGAAGAAAATGAGGAGGAAAATGAAAATGGTGTTCCTGACAAATCTGAGGATGAAACACCAGAGAAATCTGAAAGTGAAGACAAAAGTGATTCTGGGAGTGAATCTGAAGATATAAAAGAAAAGAAAAAACCTTCTAAAACATCATCCACAAAGAAAGAATCTGCTAAGAAAAGTAAAATTGAGAAAATTACAGTTCCCAATAAATCTCGCTCACCACCAAAAAGAGCACCTAAGAAATCATCATCCAACCTCTCAAAGTCTGATGAGGATAGTGATGAAAGTCCAAAGGTCTTTTCAAGGAAGAAGAAAAATGAGAAAGGAGGAAAGCAGAAGATGTCAACACCAACTAAGTCTGCCTCCAAAGAGAAAACTGAAAAGGTTACTAGAGGAAAAGGCAAGAAGAAAGAGAAATCAAGCCCCAGTGATAATCAGTTGCATGATGCGATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTTACTGACATTCTGAAGAAACTTGCTAAGCAATTTGATATGGATCTCACTCCAAGAAAGGCAGCTATAAAGCTGATGATCCAGGAAGAGCTGACAAAACTAGCTGATGAAGCAGATGATGAGGATGGAGAAGAGGATGCTGAGAAAGATGAAGCCCCATCTACAGGCCAGGAGGTTAAAGCCTGA 1500 0.3927 MKRRKKKWRWRRRMKMWIRIILISQKKKKAEDSKGEKGSKKRVRGKINGEKVKGKRKEVKKTEPRTPTIDRPVRERKSVERLVASIEKDATKEFHIEKGRGTPLKDIPNVAFKLSRRKTDDTFKLLHTILFGRRGKAIQIKSNISRFSGFVWRDNEEKQMIKVKEKLDKCNKEKLLEFCDVLDISINKATTRKEDIIAKLVDFLVAPHATTTVLLAEKEKPSKGTKRKRVVKRGSSRSGTTSRRSAKSQKKNEDSSVVRRMSATDTEDESEEDEKDEENEEENENGVPDKSEDETPEKSESEDKSDSGSESEDIKEKKKPSKTSSTKKESAKKSKIEKITVPNKSRSPPKRAPKKSSSNLSKSDEDSDESPKVFSRKKKNEKGGKQKMSTPTKSASKEKTEKVTRGKGKKKEKSSPSDNQLHDAICEILKEVDFNTATFTDILKKLAKQFDMDLTPRKAAIKLMIQEELTKLADEADDEDGEEDAEKDEAPSTGQEVKA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00782 499 MobiDBLite consensus disorder prediction 357 377 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 392 421 - -
Pumo1g00782 499 Coils Coil 153 173 - -
Pumo1g00782 499 Gene3D - 408 471 - -
Pumo1g00782 499 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 415 470 IPR014876 -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 472 499 - -
Pumo1g00782 499 Coils Coil 263 283 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 216 421 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 25 68 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 289 340 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 246 266 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 267 288 - -
Pumo1g00782 499 MobiDBLite consensus disorder prediction 472 487 - -
Pumo1g00782 499 SUPERFAMILY DEK C-terminal domain 410 469 - -
Pumo1g00782 499 FunFam DEK domain-containing chromatin associated protein 407 471 - -
Pumo1g00782 499 PANTHER DEK PROTEIN 26 486 IPR044198 GO:0003677|GO:0006325
Pumo1g00782 499 Pfam DEK C terminal domain 416 469 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00782 Pumo-Chr1 11603583 11624214 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00782 K17046 - gmx:100818537 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00782 1 11603583 11624214 Pumo1g00782 1 11603583 11624214 ECH