Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00779 ATGGACGAAGGTGAGGGAGTGTACGGCGAGGGCGGCGATCCCATGGATCAGTTCCACCGTAACGAGGCTATATCTGCCGTCGCCGACGAGGGTTTCTTGGGCGAGGAGGACGACGATTACGAGGATCTTTACAACGATGTTAATGTCGGCGAAGGGTTTCTTCAATCGTTGCGGAAGAACGAGGATTCGGGGTTTCGAAACGACGTCGTTGAGGACAAGAAGCCGCTGCCGGCGGCGGATCAGGATCCGGGTGGCGGGGTTTCGATACCAGGTGTCGGTGGCGGCGGTGGCGGCGGGGTTGTGGAAGGCAGGGGTTCTGGGAATGTTGATGGGTTTCAGAATCAAGGGTTTAGAGGGGGTAATTCTGGTGGAGGAGGTGGATCAGGTGAGATTAAGGTTGAATTAGGGCAGCCATCTGGGAAATTGAGTGAAATTGAGGAGCAGGGTGGGAGTGATGGTGCTGCAGTGCAGGGAATTGGGCAGCAACCACATGGTGGAGTTGTTGGGAGTGTGGGGAATGAGGGGATGGTGAGACAAGGTGGTGTTGCTGTTGCTGGTGGTGGAGGAGGAGGGAATGTTAATAGGGTTGGTGGAAATGGTGTTGGTAATAGTGTGAGTACTGTTAATAGTGTTAATACTGGAGGGGGTGGAGGTGGGGTGGGTGCAGGTGTTGGTGTTGGTGGTGGTGGGGGTGCTCCTCCTGGTGGTGGTGGGGGTACCATACTATTTGTGGGTGACTTGCATTGGTGGACTACTGATGCTGAACTAGAAGCTGAGCTTTCTAAGTATGGATCTGTGAAGGAGGTGAAGTTTTTCGATGAGAAGGCCAGTGGGAAATCAAAGGGGTATTGCCAGGTTGAGTTTTATGAAGCTTATGCTGCGACTGCTTGTAAGGAAGGGATGAATGGACATGTTTTTAATGGGAGGCCGTGTGTTGTTGCATTTGCGTCGCCTTTTACGGTTAAGAAAATGGGGGAGGCTCAGATAAACAGGAATCAGCAGATGAACCAATCTGCGGTTACCCAGGGAAGGAGGGGGCCTGCTGATGCCGGGGCTAAGCCGGGTGGGAGTAACATTTCAACGGGTGGTAATTACCAAGGTGGAGATGGGAATAGAGGTTATGGAAGAGGAGGAGGTAACTGGGGGAGAGGGAATAATCCTGGTATGGGGAATAGGGGGCCTGTTAATCCAATGAGGAATAGGGGTGGTGGGATGGGTGGGAGAGGTATAATGGGTAATGGTGGAAATGGATTTGGACAGGGTATGGGTGGTACCCCTCCTCTGTTGCATCCTCAGTCAATGATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCCATGGGTAGAATGGGTAGTTATGGAGGCTTTCCCGGTGCTCCAACTCCTCCATTCTCTGGGATTTTGCCTTCATTCCCTGGTGTTGGAGGTGTTGGTTTGCCTGGAGTGGCACCTCATGTTAATCCAGCCTTTTTTGGAAGAGGGATGCCTGTTAATGGTATGGGGATGATGCCAACATCAGGCATGGATGGTCCTAATATGGGAATGTGGTCAGATCCCAATATGGGTGGATGGGGTGGTGAAGAGCCCGGTGGTGGGAAGGCTGGAGAGTCCAGTTATGGGGAGGAAGCTGCATCTGACCATCAGTATGGTGAGGTGAGTCATGATAGAGCTGGGTGGCCCATGAGGGAAAAAGATAGAGGTTCAGAAAGAGACTGGTCTGGTTCTTCTGAGCGAAGGTATAGAGATGATAGAGATCAAGGATATGAGAGAGATGCACCTAGAGAAAAAGATATGGGCCATGACAATGAATGGTCTGAAAGAAGGCATCGTGATGATAGAGAATCGGGCCGAGAAAGATCTCGTGACCGTGATCGTGACCGTGAACGATCTCGAGACCGTGAACGTGACCGTGAAAGGGATCACCGTGAGCGTGACAGGCACCGAGAAGATAGGGACAGGTATGCTGATCATCATAGGTACAGAGACCGGGAAGCAGAACACGATGATGAGTGGGAGAGGGGACGGTCATCAAGGACTCACAGCAAGTCACGATTATCACAAGAGGAGGAACACCATTCTAGACCAAGAGATGCTGATTATGGGAAGAGGCGGCGGCTTACTTCTGAATAA 2130 0.5174 MDEGEGVYGEGGDPMDQFHRNEAISAVADEGFLGEEDDDYEDLYNDVNVGEGFLQSLRKNEDSGFRNDVVEDKKPLPAADQDPGGGVSIPGVGGGGGGGVVEGRGSGNVDGFQNQGFRGGNSGGGGGSGEIKVELGQPSGKLSEIEEQGGSDGAAVQGIGQQPHGGVVGSVGNEGMVRQGGVAVAGGGGGGNVNRVGGNGVGNSVSTVNSVNTGGGGGGVGAGVGVGGGGGAPPGGGGGTILFVGDLHWWTTDAELEAELSKYGSVKEVKFFDEKASGKSKGYCQVEFYEAYAATACKEGMNGHVFNGRPCVVAFASPFTVKKMGEAQINRNQQMNQSAVTQGRRGPADAGAKPGGSNISTGGNYQGGDGNRGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGMGGTPPLLHPQSMMNQGFDPAFGGPMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDHQYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDMGHDNEWSERRHRDDRESGRERSRDRDRDRERSRDRERDRERDHRERDRHREDRDRYADHHRYRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00779 709 MobiDBLite consensus disorder prediction 334 426 - -
Pumo1g00779 709 Gene3D - 231 326 IPR012677 -
Pumo1g00779 709 SUPERFAMILY RNA-binding domain, RBD 238 325 IPR035979 GO:0003676
Pumo1g00779 709 CDD RRM_CFIm68_CFIm59 242 315 - -
Pumo1g00779 709 MobiDBLite consensus disorder prediction 58 173 - -
Pumo1g00779 709 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 242 311 IPR000504 GO:0003723
Pumo1g00779 709 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 240 318 IPR000504 GO:0003723
Pumo1g00779 709 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 20 641 IPR034772 -
Pumo1g00779 709 SMART rrm1_1 241 314 IPR000504 GO:0003723
Pumo1g00779 709 MobiDBLite consensus disorder prediction 547 709 - -
Pumo1g00779 709 MobiDBLite consensus disorder prediction 509 709 - -
Pumo1g00779 709 MobiDBLite consensus disorder prediction 1 23 - -
Pumo1g00779 709 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00779 Pumo-Chr1 11558525 11564040 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00779 K14398 - gmx:100813702 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00779 1 11558525 11564040 Pumo1g00779 1 11558525 11564040 ECH