Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00771 ATGGATTTCTTGGCTAAATACCAGTTTGATTTTAACGCTTGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGGAAGCATTAAGGAGTTTGAATTCTACATATGATAGTGAGTGGTCAGACATTGGTAAATTAAAAGATGTTAGGGACATACCATTGCTCAGTGCGGCCGACATCTTGTTCACTGCACGAATGAAAAATAAATTCAGTGAATGGCGTGATGGGTTATTTCAGGAGCAAAATCAAGAAGACCAAATTCAAGGAATTTCAGAAGACTCAAAATTTCAAGTGATTTTTTTTGAGATGCATCCAGCTCTTAGGCTTAATGGATTCACGTCTCACCAGCTTAAATTGATTCAGTTGGTCATCAGAAAACACTTCAAAGATCTTTCTTATGTCAGTGTGAACAGTGAAGCTTCTGGTTCACAACAATTAGTCGTATATACAGACTCAAAGGATGAATTAAACTTACTTCTGAAGAAGGTGAAAGAAGAAAATTACAGGGAAAAAGAGACGAAGATCCAAGCTGCTGTGGGATTTCGTCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGTCACAATTGTTTTTTAGATATTGCTCATGTCTACAGCAAATTTATAGGCCCTCTTCCGGGGACTCCTGAAGAGTTTGTTGCCTCTGTTAACAAGTGCTTTCCGCACATTGTTGACACCAAGATACTCCTGAACACTAATTTGATGTTCCAAGAAAGGATGAAAAGGTCCAGAAAATCACTGGCCTCTGCATTCACTTCATTTTGTCCACAAATTGCGGGTGGCTCCAGAAGTACCGATCTAGGTTCACTCTCACATGTGAAAGTGGACGTTGAGGTTGATGATTCGAGATCATGCAGCTGGAACCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGTATCGATTTTAAACTCCGTGATTCTTCAAAACAATTAGCCCTCAATGAGAAACTGCAGAAGTATGTTAATCGTCTATATCTCAGTTGGATGCATGGGGACATTATTGATCTAAGTACTGGTAATAAGGTTGCAGATTCTTCACCCCACCAAAGTCTCAAGAAGCGGTACCCAAAAATTTTGTTTGAGAACATTGTTATTATTTGGGGATTTCCTTCTAAGCTGAAGGCAAATGAAGTAAGAGAGTGCATATCTAAAGTATTTGGACCAACTTCTGTAGTTTGTGTCTTCCACTTGGATGCAACTGCAGCATTCGTTCAGTTTAGCAAAACTGAACTAGTTTCAGATTTTCTTTTAGTGAAGGATTCCTTAGAGAGAAGTGATGGTGCAATCTCGGTTTTGCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGCTGCCAATTATGATACTTATAAAGAAATATGTCGTTCACCCTTATCAGAAGGTCTGTTTGCTGATCAGGCAAAGGCAGTTGGTATAAAATGGAAGACCAAATTGACAGAATACAAGGTAGCATTGGGGAGCGAAGATCATGAAAATCCAAGTGTACAAGTTAATGTAAATACAGCTATGAAGAATGTAGAAAAGACTAAGCCAAACACAATTGATCAGTTAAGAAATGCTCCATCTCGGGGGCAAGTCTCAACTTTTGAGATTGAAGAGTCTTCTTGTGTTGCAGAAGCCAACTTGTGA 1716 0.391 MDFLAKYQFDFNACIHEGISYLSREQEREALRSLNSTYDSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISEDSKFQVIFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSEASGSQQLVVYTDSKDELNLLLKKVKEENYREKETKIQAAVGFRHVIDLLSSEQKLIVGHNCFLDIAHVYSKFIGPLPGTPEEFVASVNKCFPHIVDTKILLNTNLMFQERMKRSRKSLASAFTSFCPQIAGGSRSTDLGSLSHVKVDVEVDDSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSKQLALNEKLQKYVNRLYLSWMHGDIIDLSTGNKVADSSPHQSLKKRYPKILFENIVIIWGFPSKLKANEVRECISKVFGPTSVVCVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEGGNTCAANYDTYKEICRSPLSEGLFADQAKAVGIKWKTKLTEYKVALGSEDHENPSVQVNVNTAMKNVEKTKPNTIDQLRNAPSRGQVSTFEIEESSCVAEANL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00771 571 Gene3D - 145 367 IPR036397 GO:0003676
Pumo1g00771 571 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 1 487 - -
Pumo1g00771 571 Pfam CAF1 family ribonuclease 1 318 IPR006941 -
Pumo1g00771 571 SUPERFAMILY Ribonuclease H-like 1 329 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00771 Pumo-Chr1 11460485 11463469 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00771 K01148 - gmx:100784997 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00771 1 11460485 11463469 Pumo1g00771 1 11460485 11463469 ECH