Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00755 ATGGCTCCCGCGAGGAAGAAACCTTCGAAGCCACGCAAATCCCCGAAGAACCCTAAGAAGACCCAACCCAAGCACGATTCCAGCTCCGAATCCGAAGAAGACACGCCGCCGCAGCTGCAACCGGAGCAACTCGAACTCGGCGACGACAACTCTGATTCCGTGTCGGAGCTCTCCTCCGACGGGGACGATCCGTTAGTCGACGATTTCCTCCAAGGAAGCGATGACGACGAAGAGAAAACCTCAGGTTCGGAGTCAGGTTTGGAGTCAGGTTCGGATTCGGATGATGATGATATTGAAAAGAAGTCGAGAGCTATTGATGAAGAAAAGGCGAGAGAGGAAGAGGATGCGGATGCCGAACTGCAGCTCAACATCAACCAAGAGTCTGATGAGTTTAGATTGCCTACCAAAGAGGAGCTTGAGGACGAGGCTCTCCGCCCACCTGATCTTCCCAATCTCCAGAGGAGAATCAAAGAGATTGTTCGTGTTCTTTCAAATTTTAAGGCTTTGAGGCAAGACGGGTCAACGAGAAAAGAGTATGTTGAACAGCTTAAGAAAGATATATGTACGTACTATGGCTACAATGAGTTTCTAATTGGTGCTCTAGTGGAGATGTTTCCAGTTGTTGAACTCATGGAACTGATTGAAGCCTTTGAAAAGCCACGCCCTATATGTCTGAGGACTAATACATTGAAGACACGCAGACGGGACTTGGCGGATGTTTTGATAAATAGGGGAGTAAATTTGGATCCTTTAAGCAAATGGTCAAAGGTTGGACTTGTTGTGTATGATTCTCAAGTGCCTATTGGTGCCACTCCCGAGTATATGGCTGGTTTCTACATGCTACAAAGTGCAAGCTCTTTTCTGCCTGTGATGGCTTTGGCTCCTCAAGAGAAGGAACGAGTTGTTGATATGGCAGCTGCACCTGGTGGTAAAACAACTTACATTGCTGCTCTAATGAAGAATACTGGAATAATTTTTGCAAATGAAATGAAAGTACCAAGGCTCAAGTCACTGACTGCAAATTTGCATCGCATGGGTGTATCTAACACTATAGTGTGTAACTATGATGGAAAGGAGCTTCCAAAGGTTTTAGGTGTCAATGCCGTTGATAGAGTATTATTGGATGCCCCTTGCAGTGGCACTGGGGTTATATCCAAAGATGAGTCTGTTAAAACCTCTAAAAGTCTGGAAGATATAAAGAAATGTGCTCATCTACAGAAGGAGCTCATTCTTGCAGCAATTGACATGGTGGATGCTAATTCAAAATCTGGGGGATACATTGTTTATTCTACATGCTCAATTATGGTTGCCGAGAATGAAGCAGTTATTGACTATGCACTCAAAAAGCGGGATGTTAAACTGGTTCCTTGTGGACTTGATTTTGGGCGTCCAGGATTTATAAGGTTTAGGGAACAACGTTTTCACCCTTCTTTAGAAAAGACAAGGCGTTTCTATCCTCACGTACACAATATGGATGGTTTTTTTGTTGCAAAGTTGAAAAAAATGAACAGCTCAAAGCCTGGTGCAAAATCATCAGAAACAGCCGAGAAGGAAGAAGATACTACTACGTCCGTGAAGGAAAAGGAGAAATCAAGTGATGGCATAAAAGAAAACGGCAATGTATCTTCTGAATCTGAATCCAAAAAGGGGAAGAAAAGAAAGTTCCCCTCAAAACCAAGTAACGGTCTAAAAGAAAATGGCAAAGAATCTTCAGAATCTGAACCCCAAAAGAGGAAGAAAAGGCAATTTCCATCTAAGGAAGAGATTTCAAAAGCCAGGGAGGAGAAGAGAAATACTTTAAGAGAAAAAAAGAGAAAAGGTAGCAAACAACAGAAGCAAAAATGA 1845 0.4331 MAPARKKPSKPRKSPKNPKKTQPKHDSSSESEEDTPPQLQPEQLELGDDNSDSVSELSSDGDDPLVDDFLQGSDDDEEKTSGSESGLESGSDSDDDDIEKKSRAIDEEKAREEEDADAELQLNINQESDEFRLPTKEELEDEALRPPDLPNLQRRIKEIVRVLSNFKALRQDGSTRKEYVEQLKKDICTYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANLHRMGVSNTIVCNYDGKELPKVLGVNAVDRVLLDAPCSGTGVISKDESVKTSKSLEDIKKCAHLQKELILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFREQRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMNSSKPGAKSSETAEKEEDTTTSVKEKEKSSDGIKENGNVSSESESKKGKKRKFPSKPSNGLKENGKESSESEPQKRKKRQFPSKEEISKAREEKRNTLREKKRKGSKQQKQK 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00755 614 MobiDBLite consensus disorder prediction 504 614 - -
Pumo1g00755 614 FunFam Ribosomal RNA methyltransferase Nop2 180 286 - -
Pumo1g00755 614 ProSitePatterns NOL1/NOP2/sun family signature. 369 380 IPR018314 GO:0003723|GO:0008168
Pumo1g00755 614 Gene3D Vaccinia Virus protein VP39 289 594 IPR029063 -
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase signature 424 440 IPR023267 GO:0001510
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase signature 302 312 IPR023267 GO:0001510
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase signature 273 287 IPR023267 GO:0001510
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase signature 484 501 IPR023267 GO:0001510
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase signature 370 382 IPR023267 GO:0001510
Pumo1g00755 614 NCBIfam NOL1/NOP2/sun family putative RNA methylase 225 501 IPR011023 GO:0003723|GO:0006396|GO:0008757
Pumo1g00755 614 MobiDBLite consensus disorder prediction 1 19 - -
Pumo1g00755 614 Gene3D Sun protein; domain 3 179 286 - -
Pumo1g00755 614 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 289 611 - -
Pumo1g00755 614 Coils Coil 586 606 - -
Pumo1g00755 614 MobiDBLite consensus disorder prediction 33 58 - -
Pumo1g00755 614 MobiDBLite consensus disorder prediction 511 535 - -
Pumo1g00755 614 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 213 502 IPR001678 GO:0008168
Pumo1g00755 614 MobiDBLite consensus disorder prediction 565 601 - -
Pumo1g00755 614 Coils Coil 110 130 - -
Pumo1g00755 614 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 185 501 IPR029063 -
Pumo1g00755 614 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 209 286 IPR031341 -
Pumo1g00755 614 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 93 504 IPR023267 GO:0001510
Pumo1g00755 614 Pfam 16S rRNA methyltransferase RsmB/F 290 500 IPR001678 GO:0008168
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 209 221 IPR023273 GO:0008168
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 232 245 IPR023273 GO:0008168
Pumo1g00755 614 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 176 196 IPR023273 GO:0008168
Pumo1g00755 614 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00755 Pumo-Chr1 11344969 11351428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00755 K14835 - gmx:100807160 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00755 1 11344969 11351428 Pumo1g00755 1 11344969 11351428 ECH