Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00721 ATGGCTTCTCCAAACAACCACAACCCTCCTCCTCCTCCCTTCGACATGCACTCCTTCTTCAACCCTCCACCACCTTCAAACCCTAACCCTAACCCTAACCCCAACCCTTCATCCTCCTACCCTCCGCCCTTCTCCGCCGCCCCCTTCCACTTCCCCAACTTCGACCTCTCCCTCCACCACCAGCACCACCGCTCCCTCTCCTTCCCCACCCAACCCATCCCTCCCCCTTCCAACCCCAACGCCGGCGCCCGCCTCATGGCCCTCCTCGGAAACCCCTCCCCAGCCCCGCCGCAGCCCCCGCCCCCCGAGTTGGTCCCCGCCTCCTCCTCCGCAGTCCTCGCCGCCGCCTCCGCCGCCGCTGCCGCCCTCACACGCCTCCCCAGCAGTAAAGTGCCCAAAGGCAGGCACTTGGCCGGGGAGCACGTGGCTTACGACGTCGACGTCAGGCTGCCCGGCGAGGTCCAGCCCCAGCTCGAGGTTGCCCCTATTACCAAATACGGGTCCGATCCTAACCCGGTTCTGGGCAGGCAGATTGCGGTGAATAAGTCGTATATATGCTATGGGCTGAAACAGGGGAACATTAGGGTGCTTAATATTCACACTGCTGTCAGGTCCTTGCTCAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTCTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGCCGTGTCTACGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTCTTCAAATAGTTGGGGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCATTGCCACAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTTTGAGGATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGATGATCCTCTGAGATGTCCTGCGGATAAGCTCATTGATGGGGTTCAGCTGGTAGGCACACATGATGGTGAGGTGACTGATTTGTCAATGTGCCAATGGATGACCAATCGATTGGTATCTGCGTCACAGGATGGCACGATAAAGATCTGGGAAGATCGTAAGACACAGCCACTTGCAATTTTGAGACCACATGATGGGCATCCGGTTTTTTCTGCTACATTTTTTACTGCTCCACACCAGCCTGATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAGCTTTGGGTCTCAGCAAGTGAAGAAGGTTGGCTGCTCCCAAGTGACACTGAATCATGGAAATGCACTCAGACATTGGAGTTGAAGAGTTCAGCTCAACCATCTAAGGATGCATTCTTCAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCATTTAGAATATGGTCCTAATCCAGAATCAACACGCATGGATTATATAGCTGAGTTTACAGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATATTACCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAGACACAGGCTATTCAGCAGTATGCTTTGGATTTAGCTCAGTGCTTGCCTCCGCCATTTGAAAATGTGGAACTAGAGAAGTCTGATGCCAGTGTTTCCCGCGATGCAATTACTGTTGAAGGATTCCACTCTTTAGATTCTTCTGCAGGTAGAACATCTGACATGTCTTTAGCCAGTGCTGCTCCCAAAACAATGTTACAAACAAGTAGTAATGAGAGTGGACTGGTGGCAAGATACCCTTTTAGCTCTGGCCATGTTGAGGCACCTATTTCTAGAGAAATCAGCGGTTCAAATACTGAAGCTAAACCTGTTACATTACCTCCTTCTAGTAGTGATGCTGATATTGTTTGTATTCCATCTCCACCTCTTCCTTTGAGCCCAAGGCTATCTAGGAAACTCTCTGATATCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGTGGACCATCCTGTTAATGATTATTCGATAGACAGACAAATGGATACCATTCATAGGAACTTGTCTGACCCATTGAATAATGATTCAAAGAATGATGAGAAGAAAATGAAGCAGGATGACATTTCTAGTGTACTTAATCCTTCTGTCATGTTTAAGCAACCAACTCATCTAATTACACCATCTGAGATCACAAAAGCTGGTTCCTCCTCTGAGACTAATATAATTGATAGGAAGAGTGAGGGAGAAGCAAAGATCCAGGATGTGGTTGATGTGGGTAATGCTGAAGTGGAAGTGAAAGTGGTGGGTGAGACAAGATCTAATCAAAGTGATGAATTTGGTCGGCAGGGGTCACAACAACATCCAGTTTCTGATAGTAAAGAAAAACTATTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATGGCCCGAGAATGCTGTGCGATATCTGGGGACACATACCATATGGAGGAACCTGGGCAACTTGATTCAACAGAAGGGGACTCCTTGGCTCAACCGCCTGATGCTGGTGAAGATGGACTCCAAGACATGGCAAAAGATGCCCATGAAAAGGTTTCTGACTCATCTACATCTGTGGCAGTGCCACCATCTCCTGCGCCTAATGCAAAAGGGAAAAGACAGAAGGGTAAAAATTCTCAACCATCAGGGCCATCTTCCTTATCTCCAAGTGCGTATAATTCAACTGATTCATTCAATGAACCAATTGGAAATTCTAGCCTCCCATCTGCTGAAAATGCTTTCCCTCAAATTCTGGCAATGCAAGAATCGCTCAATCAGTTATTGACAATGCAAAAAGAGATGCAGAAGCAAATGACAATGATGGTTGCTGTTCCAGTGACAAAAGAAGGTAGAAGGCTTGAGGCTGCACTAGGGAGAAACATGGAAAAAGCTGTCAAGTCCAACAGTGATGCTTTGTGGGCTCGAATTCAGGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATCCAGCAAGTTACAGGTTTGATTAGTAACTTTATGAATAAGGATCTACCAGCAATACTAGAGAAAACAGTAAAGAAGGAAATGGCTTCGGTTGGGCAAGCAGTAGTACGTGCAATGTCTCCTTCTGTGGAGAAAATAATATCTTCTGCCATTGTGGAGTCTTTCCAGAGAGGAGTGGGTGACAAGGCAGTGAACCAACTTGATAAATCAGTTAATTCAAAACTTGAAGCTACTGTAGCTAGGCAAATCCAAGCACAATTTCAGACAACTGGCAAACAGGTGCTTCAGGAGGCACTCAAATCCAGTTTTGAAACATCAGTGGTTCCTGCATTTGAGATGTCATGTAAAGCCATGTTTGAGCAAGTGGATGCTACATTTCAGAAAGGCATGGTTGAACATTCAACTGCTGTGCAGCAACGCCTTGAATCTGCACCTACTTCATTGGCAATGACACTAAGGGATTCCATTAATTCAGCATCATCAATTACTCAAACCTTGAGTAGAGAAGTGCTTGAGGGCCAGAGAAAGCTAGTGGCATTAACAGCTACAAGAACAAACTCGGGCACATTAAATACTCTGCCCGTCCAGCTGAACAATGGTCCTTTACTTCACGAAAAGGTTGAGGTGCCTCTAGATCCCACACAAGAGCTAGCAAGGTTGATTTCTGAACGGAAATATGAGGAGGCTTTCATTGGAGCTCTACATAGAAGTGATGTATCCATTGTATCTTGGTTATGTACTCAGGTTGATTTACATGGACTCTTGTCAATGGCACCTCTTCCTTTAAGCCAAGGTGTACTGCTTTCACTTCTGCAGCAATTGGCTTGCGATATTAACAGCGATACACCGCGAAAGATTGCGTGGTTGACAGATGTGGCTGCTGCCATAAACCCGTCAGACCCGACGATTGCAATGCACACGCGATCCATCTTTGAGCAAGTGTATCAGATACTGAATCATCAACGTAGCTTGCCTACAATGACTGGAGCTGATCTCTCAAGTATCCGTCTTTTATTGCATGTCGTCAACTCCATGCTTATGACATGTAAATGA 4029 0.4629 MASPNNHNPPPPPFDMHSFFNPPPPSNPNPNPNPNPSSSYPPPFSAAPFHFPNFDLSLHHQHHRSLSFPTQPIPPPSNPNAGARLMALLGNPSPAPPQPPPPELVPASSSAVLAAASAAAAALTRLPSSKVPKGRHLAGEHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKPQITANIVIALQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGEAFVADDPLRCPADKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLAILRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAQPSKDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPFENVELEKSDASVSRDAITVEGFHSLDSSAGRTSDMSLASAAPKTMLQTSSNESGLVARYPFSSGHVEAPISREISGSNTEAKPVTLPPSSSDADIVCIPSPPLPLSPRLSRKLSDIRSPQSNLSDHVVDHPVNDYSIDRQMDTIHRNLSDPLNNDSKNDEKKMKQDDISSVLNPSVMFKQPTHLITPSEITKAGSSSETNIIDRKSEGEAKIQDVVDVGNAEVEVKVVGETRSNQSDEFGRQGSQQHPVSDSKEKLFCSQASDLGIEMARECCAISGDTYHMEEPGQLDSTEGDSLAQPPDAGEDGLQDMAKDAHEKVSDSSTSVAVPPSPAPNAKGKRQKGKNSQPSGPSSLSPSAYNSTDSFNEPIGNSSLPSAENAFPQILAMQESLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNMEKAVKSNSDALWARIQEENAKNEKLLRDRIQQVTGLISNFMNKDLPAILEKTVKKEMASVGQAVVRAMSPSVEKIISSAIVESFQRGVGDKAVNQLDKSVNSKLEATVARQIQAQFQTTGKQVLQEALKSSFETSVVPAFEMSCKAMFEQVDATFQKGMVEHSTAVQQRLESAPTSLAMTLRDSINSASSITQTLSREVLEGQRKLVALTATRTNSGTLNTLPVQLNNGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCTQVDLHGLLSMAPLPLSQGVLLSLLQQLACDINSDTPRKIAWLTDVAAAINPSDPTIAMHTRSIFEQVYQILNHQRSLPTMTGADLSSIRLLLHVVNSMLMTCK 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 766 790 - -
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 608 629 - -
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 608 622 - -
Pumo1g00721 1342 SUPERFAMILY WD40 repeat-like 176 435 IPR036322 GO:0005515
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 62 106 - -
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 875 910 - -
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 1 44 - -
Pumo1g00721 1342 FunFam enhancer of mRNA-decapping protein 4 159 472 - -
Pumo1g00721 1342 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 160 471 IPR032401 -
Pumo1g00721 1342 Gene3D - 265 511 IPR015943 GO:0005515
Pumo1g00721 1342 FunFam Enhancer of mRNA-decapping protein 4 1254 1340 - -
Pumo1g00721 1342 Gene3D - 159 258 IPR015943 GO:0005515
Pumo1g00721 1342 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 368 IPR001680 GO:0005515
Pumo1g00721 1342 ProSiteProfiles Trp-Asp (WD) repeats profile. 207 249 IPR001680 GO:0005515
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 817 910 - -
Pumo1g00721 1342 Gene3D - 1254 1341 IPR044938 -
Pumo1g00721 1342 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 207 244 - -
Pumo1g00721 1342 SMART WD40_4 322 359 IPR001680 GO:0005515
Pumo1g00721 1342 SMART WD40_4 200 240 IPR001680 GO:0005515
Pumo1g00721 1342 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 326 359 - -
Pumo1g00721 1342 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 1 1340 IPR045152 GO:0031087
Pumo1g00721 1342 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00721 Pumo-Chr1 11041149 11050882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00721 K12616 - gmx:100798228 2297.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00721 1 11041149 11050882 Pumo1g00721 1 11041149 11050882 ECH