Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00718 ATGGATGGGAAAAGCTCTCTACAAATAACTAGAAGTGGTACTGGTGCTTATGATGATGATGGACATGCCAAAAGGACTGGGAATTTGAAGAGTGCTGTAGCTCACATCATTACTGCTGTTATTGGTTCTGGTGTTCTTTCTCTTGCATGGAGCACTTCCCAATTAGGATGGATTGGAGGGCCAGTTGCCTTGCTTTGTTGTGCAATTGTCACCTATATTTCTTCATTCCTCCTGTCTGATTGCTACAGAACTCCTGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAGTTTATCTTGGTTATAAAAGGACATGGATAGCTGGCTTCCTTCAATTTTTGACTTTATATGGGACCAGTGTTGCTTATGTACTAACCACAGCAACCAGTTTGAGTGCAATTCTGAGATCAAATTGTTTTCACAAGAAAGGGCATGAGGCTCCTTGTAAATATGGGGGCAATCTGTATATGGCACTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCGGATCTCCATAACATGGCATGGGTTTCAGTTGTTGCGGCACTCATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATGGCAACAGTCATAAAAAATGGAAGAATTATGGGGAGCTTGACAGGAATACCAACTGATAAAATTGCTGACAAATTTTGGTTAATCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATACTCCATTCTCCTTCTTGAGATCCAGGACACTCTAGAGTCTCCACCACCTGAAAATCAAACCATGAAAAAGGCCTCCATGGTTGCAATCTTCATTACAACATTCTTCTACCTGTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGATACACCAGGAAACCTCTTGACAGGGTTTGGCTTTTTTGAGCCTTTCTGGCTCATTGACCTTGCTAATGCTTGCATCATTCTTCACTTGGTGGGAGGATATCAGATTTACTGTCAACCGATATACAGTACAGTTGATAGATGGGCTTCAAGAAAATTCCCCAACAGTGGCTTTGTGAATAATTTCTACAAAGTGAAACTGCCTTTGCTTCCTGGTTTTCAGCTAAATCTTTTCAGGTTCTGTTTTAGAACAACCTATGTGATTTCAACCACTGGCCTTGCAATCTTTTTTCCTTACTTCAACCAAATTCTAGGAGTGTTAGGAGCCATAAACTTCTGGCCATTGGCTATATACTTCCCAGTAGAGATGTACTTTGTGCAGAAGAAAATTGCAGCTTGGAGTAGCAAGTGGATTGTTCTCAGAACATTCAGCTTTGCTTGCTTTCTTGTCACTGTAATGGGTCTGGTTGGCTCACTTGAAGGAATAGTAAGAGCCAAATTAAATTAG 1386 0.4105 MDGKSSLQITRSGTGAYDDDGHAKRTGNLKSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRVYLGYKRTWIAGFLQFLTLYGTSVAYVLTTATSLSAILRSNCFHKKGHEAPCKYGGNLYMALFGLVQIVMSFIPDLHNMAWVSVVAALMSFTYSFIGLGLGMATVIKNGRIMGSLTGIPTDKIADKFWLIFQALGDIAFAYPYSILLLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFFEPFWLIDLANACIILHLVGGYQIYCQPIYSTVDRWASRKFPNSGFVNNFYKVKLPLLPGFQLNLFRFCFRTTYVISTTGLAIFFPYFNQILGVLGAINFWPLAIYFPVEMYFVQKKIAAWSSKWIVLRTFSFACFLVTVMGLVGSLEGIVRAKLN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00718 461 PANTHER OS05G0424000 PROTEIN-RELATED 31 451 - -
Pumo1g00718 461 Pfam Transmembrane amino acid transporter protein 26 455 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00718 Pumo-Chr1 11010746 11015490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00718 6 443 Organic Solute Cotransporters AT1G77380 53.741 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00718 K24917 - gmx:100818535 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01750 9 46641263 46643976 Pumo1g00718 1 11010746 11015490 PCT