Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00538 ATGAGTGCAGAGATTGATTCAACTTCTGCTCCTGAACCTCACAAGATGTCTGGAGCTTCATCTGCAGCAACTACTAGTGGCCAAAAGCTCTCAATATTTGCTGCCAAATCTGGGTTTGTCATCCCTAAAAACAAATTGTCAGGGTCACTGGTCCCTATTTTCCGAGGGGCTCAAAAACATGCTGTCACTGGTGCCATCAATGAAGAAAGTTCAAAACAAATTGAGAGGAGATCAAAATGGGGACCTGATCTCACACAAGATGCAACTGTCAGGCGGGGAAAAGTTTTAGCTTTGCAGATTCGAGTGGATCAAATTACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTGCCATTGGGAGCTGAGAATCCAGATCAAAGCAAATCTGGCCCTCAAATTAACAGCAAGAAGTCAGAAATGCTCGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAATTAGATCCCAGTTACAAGCCTCCACGTGGTTTTAAACCATTGTTAAAAGAAGCCAGCATTCCTTTGCCTGTCCAAGAATATCCTGGGTACAATTTTGTTGGTCTAATATGTGGGCCTGAAGGTGATAATCAAAAACAACTAGAAAAGGAAACTGGTGCAAAGATAAAAATTCATGGAATCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCTGGAACTGATATCCAGTGCAGTTACAAAGAGATGCATGTTAACCTATCAGCTGATAGTTTTGAAAAAGTGGATGCTGCAATGTCAATCATTGAACTGCTAATTACCTCTGTAACTGGGAATTTAGCTGCTGGTTCTACACCCTCTATATCAGTTTCTAGGGACAGCACTAATGTTCCGAGTCAAAGCCAAGAAGGCCCTCCTTCTCATGCAGATTCTCTATCTCTGGAAAACCAGGCTGTGTTGCAACCAGTAGCTGTTACACAAATGCATGGTGATAACTTCCAATACTCTAGTCCATGGTTTTCAGTGGTTGCATCTCATACCCCTGTGTATGCTTCGTCTGGCAGTGTAGCCCCCCCAAATCCACTAGGTCTAGCTAGAACTCCCCATTTTCCATCACAAACTTCAAACATGACTTCGACTTTTGGTGCTCAACCTGGACCTGTTACTGGATTTCAGCCGATTATTCCAAATCAACATGTTTCTGTGCAAGCACCACCACCAAGACAGATTTTACAGTATTCGCATATGACTCAGACAAGTCCCTTGGGTCACATTGGGCCCCCAAGAAATCCTTCTATAATATCTGTACAGAATTTGTCAACTCCAACAAATGCTTCACTTTCATTTCCTATTACTTTAAGCCTTCCAACACCAATAGGACAACATCAGACATCAATGTCTTCAATGCATCTACCAATATCTGGTATATCATCATCACCAATACCTAACCAGCCATTGACCCATCTTGGGGTCTCTTCTGGCCAGAATGAAGCCCCTGTCACTGTTAAAATGTCTGTTGGTCCCAGCAATATGGGGCCAATGGCTCCGCCAGTGGTTCCACCTGCAAGACCTGTTTCTCTGCATCAACAACCGGATGTTGCATTTAAGCCACCACAGTCAAATATGTCAATGATGCCACGATCTAACACCTTTCCTCCACATCAAGCAGTAATTTCCCCTGGACAACTATCTTCTTTGAGACCAATGCCTGCACCTACACATTCATCTGCAAACCATTTATCGGGACCTGTTTCATTTCCTTCACCTGGAATATCCCCTTCACTTCCATTGCCTCAGCAAGCAGGAATACCTAATTCTGCTTCTGGAGTTCCTCCTTATCACACCCATGTAAAACCACCAGTCTTGGTGACATCAAAATCTGGAAATTTTACTTTTCAATCACATCCGCCCAATGCAGACTACGGTCAAGTGTTTTCTGGACCAAACAGTCAATCAGGTGCTACACAAGAGCCACCTTCTGGTCCACGACCTCCACCATTTGGGTTTGCTTTGCCTGATCAGCCTCGTCAGATCTTTCCAAGGACACAATTCCCTGGTCAAGTGGATCAAGCCATTCCCTTTGGGGGAAGATCAGGTTCCATCTCAAACTCAATTCCACCACCCAGACATGCTGTATTTCCATATGCTGGTCAACCTGCACCTAGATCACCAGTCCCACAAATGGGTATGAAGAACTTGATTTCTGCCCCTCAAATGCCAAATTTGACCAGTGCTGGTGCCCCAAGAGGCATGCCTATTCGACAGAGCTATCCTGCTCAGATGGCACGGCCAGATATTCCGATGCATCTGAATCAAAAGTTTGTCAACAATCCTCCCATGGCTTCTGGTAAGATAGCATATCCTGCGGACCAAATTTATGATCCCTTTTCACCCACTTCTGCACCTCCACAACAGAAAGGTAATTCTGGAAAATGA 2412 0.4411 MSAEIDSTSAPEPHKMSGASSAATTSGQKLSIFAAKSGFVIPKNKLSGSLVPIFRGAQKHAVTGAINEESSKQIERRSKWGPDLTQDATVRRGKVLALQIRVDQITKQLESEKLEVGDTQNLPLGAENPDQSKSGPQINSKKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGYNFVGLICGPEGDNQKQLEKETGAKIKIHGIKADTGEKGEIKPGTDIQCSYKEMHVNLSADSFEKVDAAMSIIELLITSVTGNLAAGSTPSISVSRDSTNVPSQSQEGPPSHADSLSLENQAVLQPVAVTQMHGDNFQYSSPWFSVVASHTPVYASSGSVAPPNPLGLARTPHFPSQTSNMTSTFGAQPGPVTGFQPIIPNQHVSVQAPPPRQILQYSHMTQTSPLGHIGPPRNPSIISVQNLSTPTNASLSFPITLSLPTPIGQHQTSMSSMHLPISGISSSPIPNQPLTHLGVSSGQNEAPVTVKMSVGPSNMGPMAPPVVPPARPVSLHQQPDVAFKPPQSNMSMMPRSNTFPPHQAVISPGQLSSLRPMPAPTHSSANHLSGPVSFPSPGISPSLPLPQQAGIPNSASGVPPYHTHVKPPVLVTSKSGNFTFQSHPPNADYGQVFSGPNSQSGATQEPPSGPRPPPFGFALPDQPRQIFPRTQFPGQVDQAIPFGGRSGSISNSIPPPRHAVFPYAGQPAPRSPVPQMGMKNLISAPQMPNLTSAGAPRGMPIRQSYPAQMARPDIPMHLNQKFVNNPPMASGKIAYPADQIYDPFSPTSAPPQQKGNSGK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00538 803 MobiDBLite consensus disorder prediction 620 673 - -
Pumo1g00538 803 Gene3D K Homology domain, type 1 170 293 IPR036612 GO:0003723
Pumo1g00538 803 MobiDBLite consensus disorder prediction 544 580 - -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 789 803 - -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 124 139 - -
Pumo1g00538 803 FunFam Splicing factor-like protein 1 isoform A 175 278 - -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 620 649 - -
Pumo1g00538 803 Pfam KH domain 190 258 IPR004088 GO:0003723
Pumo1g00538 803 MobiDBLite consensus disorder prediction 277 303 - -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 116 139 - -
Pumo1g00538 803 SMART kh_6 173 266 IPR004087 GO:0003676
Pumo1g00538 803 Gene3D - 89 167 IPR047086 -
Pumo1g00538 803 Coils Coil 95 115 - -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 767 803 - -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 544 604 - -
Pumo1g00538 803 PANTHER RNA-BINDING PROTEIN RELATED 27 634 IPR045071 -
Pumo1g00538 803 MobiDBLite consensus disorder prediction 1 23 - -
Pumo1g00538 803 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 177 271 IPR036612 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00538 K13095 - gmx:100777227 1363.98