Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00537 ATGTGGTGTGGAATAGTGAGAGTGATGGTGATTTGTTTGATGATGGGGATGAGCAATAGCATGGTGGAGGGAGGGAGTTGGTGCGTGGCGAAGATTGGGGCGAGCGAGGAAGCACTGCAGACAGCATTGGACTCTGTATGTGGAGGCGGCGGTGGAGCTGATTGCGCTCCCATTCAGCCAGATGGCCTCTGCTACATTCCCAACACCCTTCAAGCTCATGCTTCTTATGCTTTCAACAGCTTCTACCAGCGCAACGCTGGAGCTCCCAATGCATGCCTCTTCCATGCTGAAACTGGATCTGCTTCCACCATAGCCCAAACCGATCCCAGCTATGGATCTTGCGTGTACCCATCCTCCGCAACCGCGAGTACTGCTGGAGTTACAAATACAACAGTGACAACACCATCGATGCCGAATGTGGCAGCACCTACCACAACAACTCCAATCCATGGCGGGGATGGTGCAGGAATGAACCCTCTAATCCCTGAAAATTCCACAGCACCTTCAAACACAATAACCACCTCTTTTTCAGTTTTCCTTCTCATTCTGTGTGTACGGTTTTCTAGTATATAA 573 0.5061 MWCGIVRVMVICLMMGMSNSMVEGGSWCVAKIGASEEALQTALDSVCGGGGGADCAPIQPDGLCYIPNTLQAHASYAFNSFYQRNAGAPNACLFHAETGSASTIAQTDPSYGSCVYPSSATASTAGVTNTTVTTPSMPNVAAPTTTTPIHGGDGAGMNPLIPENSTAPSNTITTSFSVFLLILCVRFSSI 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00537 190 SMART X8_cls 26 116 IPR012946 -
Pumo1g00537 190 Gene3D - 19 129 - -
Pumo1g00537 190 PANTHER BETA-1,3 GLUCANASE 18 129 IPR044788 -
Pumo1g00537 190 Pfam X8 domain 27 95 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00537 Pumo-Chr1 7205463 7210990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00537 23 118 Glycoside Hydrolase AT4G26830 48.958 7.10e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00537 - - gmx:100306413 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00537 1 7205463 7210990 Pumo1g00537 1 7205463 7210990 ECH