Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00536 ATGCTGTTATTGCACTTGAGTCCTGAAATGGTTTGGGTTATGCTGTGTGTGTTGTTTTCACTAAGTTTTTTCATTGTTGATGGCGGAGTTCCAACCACTCTGGATGGACCCTTCAAGCCTGTGACCGTTCCTCTTGATCAGAGCTTCCGAGGAAACGCCCTTGACCTGCCAGATACAGATCCTCTGCTTCAAAGGACCGTTGAAGGGTTCCAGCCAGAACAAATCTCTCTTTCACTCTCTGCTTCTCACGATTCTCTTTGGATTTCTTGGATTACAGGGGAATTCCAAATTGGGGACAATATAGAACCCTTAGATCCTGAAACTGTTGCTAGCATAGTTCAATATGGAAGGTTCGGAAGGTCCATGAGCCACCAAGCTACGGGTTATTCCCTCGTTTACAGTCAACTTTATCCTTTTGAAGGCCTTCAGAACTACACCTCTGGAATTATACATCATGTTCGTCTCACAGGATTGAGACCCAACACACTATATCAATATCAATGTGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTATTTCAGGACTATGCCAGTTTCAGGCCCCAAGAGCTACCCTAGCAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTTAATCATATGACCAGTAACCATCCTGATCTTATTCTGTTGGTTGGAGATGTTAGTTATGCCAACCTCTATCTTACTAATGGCACTGGGGCAGACTGCTACTCTTGCTCATTTCCTAACACTCCCATCCATGAGACATATCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAGCCTCTGATTTCTTGTGTCCCAATAATGGTAATAGAAGGGAATCATGAGATTGAAGCACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCATTCCCATCAGAAGAGAGTGGATCATCATCCACTTTCTATTATTCTTTCAATGCTGGAGGGATACATTTTATAATGCTCGGGGCCTACATATCGTATGACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACTTGGCTTCTGTTGACAGGGAAGTAACTCCTTGGTTGATAGCTACATGGCATGCACCTTGGTATAGCACCTACAAGGCTCATTATAGAGAAGCAGAGTGTATGAGGGTAGAGATGGAAGACTTACTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACCGGGTATACAATTACACATTGGATCCTTGTGGTCCTGTTTATATCACGGTTGGAGATGGTGGTAACAGGGAAAAGATGGCAATCACACATGCTGATGAACCTGGACAGTGTCCAGAACCATCAACTACACCAGATGACTATATGGGTGGCTTCTGTGCCTTTAATTTTACATCCGGTCCAGCAGCAGGTAACTTCTGCTGGGACCGACAGCCTGATTATAGTGCTTTCAGAGAAAGTAGCTTCGGTCATGGCATTCTAGAGGTGAAAAATGAAACCCATGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGGCAGTGCTGGAGATGAGATTTACATTGTTAGGCAACCTCAAAACTGCCCACCATTCAAGCCAGAGGAGGGCGCTAAAAAATTTAACTTCAAGATGCATTAA 1653 0.4368 MLLLHLSPEMVWVMLCVLFSLSFFIVDGGVPTTLDGPFKPVTVPLDQSFRGNALDLPDTDPLLQRTVEGFQPEQISLSLSASHDSLWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRSMSHQATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSYANLYLTNGTGADCYSCSFPNTPIHETYQPRWDYWGRYMQPLISCVPIMVIEGNHEIEAQAENQTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVDREVTPWLIATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGQCPEPSTTPDDYMGGFCAFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYGSAGDEIYIVRQPQNCPPFKPEEGAKKFNFKMH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00536 550 Gene3D - 459 534 IPR029052 -
Pumo1g00536 550 Gene3D - 191 458 IPR029052 -
Pumo1g00536 550 SUPERFAMILY Purple acid phosphatase, N-terminal domain 50 186 IPR008963 GO:0003993|GO:0046872
Pumo1g00536 550 Pfam Calcineurin-like phosphoesterase 196 408 IPR004843 GO:0016787
Pumo1g00536 550 Gene3D - 71 187 - -
Pumo1g00536 550 SUPERFAMILY Metallo-dependent phosphatases 196 517 IPR029052 -
Pumo1g00536 550 CDD MPP_PAPs 191 528 IPR041792 -
Pumo1g00536 550 FunFam Purple acid phosphatase 191 453 - -
Pumo1g00536 550 Pfam Purple acid Phosphatase, N-terminal domain 72 184 IPR015914 GO:0003993|GO:0046872
Pumo1g00536 550 PANTHER ACID PHOSPHATASE RELATED 12 531 IPR039331 GO:0003993
Pumo1g00536 550 Pfam Iron/zinc purple acid phosphatase-like protein C 423 515 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00536 Pumo-Chr1 7200374 7204475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00536 72 433 Miscellaneous Gene Families AT1G13900 24.819 2.92e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00536 K22390 - gmx:100784006 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00536 1 7200374 7204475 Pumo1g00536 1 7200374 7204475 ECH