Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00534 ATGATGAAGAAGCAGCTGCCGGAGTGGATGAACAGTTCTCTGTGGTCCACCCCCTCCGACTACCATCGCTTTGACCCACCCTCACCTCCCTCTCCTCCTCCTCCTCCTCCTCCACCTGTCAGAGAAGATCCTCCGACAATCCCAACCAATCACAATGCCTCTCCTTCTTCTTCCTCCGTCTCTTCTGCTTCTGCTTCTGCTTCCGATGACATCTCCCGGCAAGGCCAGGCTCAGGTTCAGTTGTTGGCCGAGTTATCTAGGAAGGTGATAGACATCCGCGAATTGAGGAGAGTCGCTTCTCAAGGAATACCTGATACTGCCGCCTCTGCTTTACGTCCTACGCTCTGGAAGCTTTTGCTTGGATATCTTCCGCCCGATCGTGCCCTTTGGTCCTCTGAATTACCCAAAAAGAGGTCCCAGTACAAACATTTCAAAGACGACCTCCTCATGAATCCTTCAGAAATCACGAGGAGGATGTACAACTCCGCTGCTCATGACATCATCCATGATGCTAAATCTCAGACTCGGGTCTTGCTTTCTAGATCACAAATCACTCATCAGGACCACCCTTTGAGTCTTGGCAAGACCAGCATATGGAATCAGTTCTTCCAGGACACAGAGATCATAGAGCAGATTGACCGAGATGTAAAGCGTACTCATCCAGATATACACTTCTTCTCTGGTGATTCTCAATCTGCAAAATCTAATCAGGAGGCTTTAAAGAACATATTAATTATTTTTGCAAAATTGAACCAAGGTATTAGATATGTTCAAGGGATGAATGAAGTATTGGCTCCTCTCTACTATGTGTTCAAAAATGACCCTGATGAGGAAAATGCGGCCTTTGCTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTATTGAGTGGGTTCCAAGATAATTTTTGTCAACAGCTTGACAATAGTATTGTTGGAATCCGTTCCACTATTACAAGATTGTCCCAGCTTTTAAAAGAACACGATGAAGAATTGTGGCGTCATCTTGAGGTCACTACTAAGGTCAATCCCCAATTCTATGCATTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTTAATTTTGCTGACATCCTTCATATTTGGGATACCATTTTAAGTGATCCAGAGGGTCCACAGGAGACACTTCTCAGAATATGCTGTGCAATGCTAATTCTCGTTCGTAGGCGCCTCCTAGCGGGTGATTTCACTTCTAACCTCAAGTTGTTGCAAAGTTATCCCTCTACAAACATTAGCCATTTGCTTCATGTAGCAAATAAGTTACGTGTACAGTCAGTCTAG 1299 0.448 MMKKQLPEWMNSSLWSTPSDYHRFDPPSPPSPPPPPPPPVREDPPTIPTNHNASPSSSSVSSASASASDDISRQGQAQVQLLAELSRKVIDIRELRRVASQGIPDTAASALRPTLWKLLLGYLPPDRALWSSELPKKRSQYKHFKDDLLMNPSEITRRMYNSAAHDIIHDAKSQTRVLLSRSQITHQDHPLSLGKTSIWNQFFQDTEIIEQIDRDVKRTHPDIHFFSGDSQSAKSNQEALKNILIIFAKLNQGIRYVQGMNEVLAPLYYVFKNDPDEENAAFAEADTFFCFVELLSGFQDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADILHIWDTILSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQSYPSTNISHLLHVANKLRVQSV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00534 432 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 312 429 IPR035969 -
Pumo1g00534 432 FunFam TBC1 domain family member 13 310 431 - -
Pumo1g00534 432 Gene3D - 311 431 - -
Pumo1g00534 432 FunFam TBC1 domain family member 13 192 303 - -
Pumo1g00534 432 MobiDBLite consensus disorder prediction 47 71 - -
Pumo1g00534 432 MobiDBLite consensus disorder prediction 1 71 - -
Pumo1g00534 432 Pfam Rab-GTPase-TBC domain 110 396 IPR000195 -
Pumo1g00534 432 ProSiteProfiles TBC/rab GAP domain profile. 106 375 IPR000195 -
Pumo1g00534 432 MobiDBLite consensus disorder prediction 23 45 - -
Pumo1g00534 432 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 84 334 IPR035969 -
Pumo1g00534 432 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 65 410 - -
Pumo1g00534 432 SMART tbc_4 99 401 IPR000195 -
Pumo1g00534 432 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 193 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00534 Pumo-Chr1 7186269 7191871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00534 K24796 - gmx:100778830 702.59