Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00511 ATGGCTTCTTCTTCTCCTCCAGACACTAGCAAGAGCATGAAGCTAGAGCGATACAACAGCTACATCCGGAGAGTGAACAGCACGAAGCTCCTAAACGCCTCCTCAAAACTCCTCTTCCGTGCCACTCTCTTAGTCGCACTGATCCTCGTCTTCCTCTTCACCTTCAACTACCCTCCCCTGGCTGACACCACCCACCGCCATGTCCACGCCCACTCCCACTTCCTCTCATCCGCATTCGGGGCCTGGGAGAAGCAGGTCCGGCACTCGGCCACCCCGCGGCGCCCGAACGGCCTCAGCGTACTGGTGACCGGCGCCGCGGGCTTCGTGGGCAGCCACTGCTCCCTGGCCCTGAAAAAGCGCGGGGACGGGGTCCTGGGGCTGGACAACTTCAACAGCTACTACGACCCCTCCCTGAAACGCGCCCGGCAGGCAATGCTATGGAAACACCAAGTGTTCATCGTGGAAGGCGACCTAAACGACACGCCGTTGCTGGAGAAGCTCTTCGACGTTGTGGCCTTCAGCCACATCCTCCACCTGGCCGCACAGGCTGGCGTCCGCTACGCCATGCAGAACCCTCAATCCTACGTCAGCGCCAACATTGCAGGCTTCGTCAACCTTCTCGAAGTTGCTAAGTCCGCCAACCCCCAACCCGCTATTGTCTGGGCTTCATCCAGCTCCGTCTACGGCCTCAACACCCAGAACCCTTTCTCCGAGCTCCACCGCACCGACCAACCCGCCAGCCTCTACGCCGCCACCAAGAAGGCCGGCGAGGAAATCGCCCACACCTACAACCACATTTACGGCCTCTCCCTCACCGGCCTCCGCTTCTTCACCGTCTACGGCCCCTGGGGGAGACCAGATATGGCCTATTTTTTCTTCACCAAAGACATCCTCCAAGGCAAAACCATCGACGTCTACCAGACCCATGAGGGTAAGCAGGTCGCGCGTGACTTCACCTACATCGACGACATCGTCAAGGGCTGCCTCGGCGCCCTCGACACCTCCCAGAAGAGCACCGGCACCGGCGGGAAGAAGCGCGGCCCCGCCCAGCTCAGAGTTTACAATCTCGGTAACACCTCACCCGTGCCGGTGGGGACCTTGGTGTCCATTCTAGAAGGTTTGCTGAACACGAAGGCCAAGAAGCACGTGATCAAGATGCCATCAAACGGTGACGTTCCCTACACACACGCCAATGTCAGCTTGGCTTACAGGGATTTCGCTTACAAACCCACCACCGATCTTGCCACCGGTCTCAGGAAGTTCGTCAAGTGGTACGTCGGTTATTACGGGGTCCAGCAAAGGGTAAAAAAGGAAAATCACCTTGACAATGAATGA 1335 0.5865 MASSSPPDTSKSMKLERYNSYIRRVNSTKLLNASSKLLFRATLLVALILVFLFTFNYPPLADTTHRHVHAHSHFLSSAFGAWEKQVRHSATPRRPNGLSVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQAMLWKHQVFIVEGDLNDTPLLEKLFDVVAFSHILHLAAQAGVRYAMQNPQSYVSANIAGFVNLLEVAKSANPQPAIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYQTHEGKQVARDFTYIDDIVKGCLGALDTSQKSTGTGGKKRGPAQLRVYNLGNTSPVPVGTLVSILEGLLNTKAKKHVIKMPSNGDVPYTHANVSLAYRDFAYKPTTDLATGLRKFVKWYVGYYGVQQRVKKENHLDNE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00511 444 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 431 IPR036291 -
Pumo1g00511 444 Gene3D - 277 425 - -
Pumo1g00511 444 PANTHER EPIMERASE-RELATED 82 432 - -
Pumo1g00511 444 Pfam NAD dependent epimerase/dehydratase family 100 337 IPR001509 -
Pumo1g00511 444 PRINTS Nucleotide sugar epimerase signature 391 408 - -
Pumo1g00511 444 PRINTS Nucleotide sugar epimerase signature 126 142 - -
Pumo1g00511 444 PRINTS Nucleotide sugar epimerase signature 316 331 - -
Pumo1g00511 444 PRINTS Nucleotide sugar epimerase signature 351 366 - -
Pumo1g00511 444 Gene3D - 101 412 - -
Pumo1g00511 444 FunFam UDP-glucuronate 4-epimerase 3 99 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00511 Pumo-Chr1 6777076 6779305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00511 1 438 Miscellaneous Gene Families AT3G23820 79.470 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00511 K08679 - gmx:100786653 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00511 1 6777076 6779305 Pumo1g00511 1 6777076 6779305 ECH