Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00507 ATGGCGTTGTTGGTGGAGAAAACAAGCAGCGGAAGGGAGTACAAGGTGAAGGACATGACGCAAGCCGATTTCGGAAGAATGGAAATCGAGCTGGCGGAGGTTGAAATGCCGGGTCTCATGTCCTGCCGCACCGAGTTCGGACCCTCTAAACCCTTCAAGGGGGCCAAGATCACCGGCTCCCTCCACATGACCATCCAAACCGCCGTCCTCATCGAGACCCTCACCGCCCTCGGCGCCGAGGTCCGCTGGTGCTCCTGCAACATCTTCTCCACGCAGGACCACGCCGCCGCCGCCATTGCCCGCGACAGCGCCTCCGTCTTCGCCTGGAAGGGCGAGACCCTCCAGGAGTACTGGTGGTGCACCGAGCGCGCCCTCGACTGGGGCCCCGACGGCGGCCCCGATCTCATCGTCGACGACGGCGGCGACACCACCCTCCTCATTCACGAGGGTGTTAAGGCCGAGCAGGTCTACGAGAAGACCGGTCAGTTCCCTGATCCGGCTTCCTCGGACAATGCGGAGTTCCAGATCGTGCTTACCATCATCAGGGATGGTTTGAAGACCGATCCGAAGAGGTACCACAAGATGAAGGACAGACTCGTCGGTGTCTCCGAAGAAACCACCACCGGTGTCAAGAGGCTCTACCAGATGCAGGCCAATGGCTCTCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCACCAAGAGCAAGTTTGATAACTTGTATGGATGCCGTCACTCGCTTCCCGATGGATTGATGAGAGCCACTGATGTGATGATTGCCGGAAAGGTTGCTGTTGTATGTGGCTACGGAGATGTTGGCAAGGGTTGTGCTGCGGCCATGAAGCAGGCTGGGGCTCGTGTCATTGTCACCGAGATTGATCCCATTTGTGCCCTTCAAGCTCTCATGGAGGGTCTTCAGGTTCTCACCCTCGAGGATGTCCTCTCTGAGGCCGACATCTTCGTTACCACCACCGGGAACAAGGACATTATCATGGTAGACCACATGAAGAAGATGAAGAACAATGCCATTGTGTGCAACATTGGCCACTTCGACAATGAAATCGACATGCTGGGGCTTGAGACCTACCCCGGTGTGAAACGCATCACTATCAAGCCTCAAACAGACAGATGGCTTTTCCCTGACACCAACACAGGCATCATTGTGTTGGCTGAGGGTCGTTTGATGAACTTGGGGTGTGCCACGGGACACCCCAGCTTTGTCATGTCCTGCTCCTTCACCAACCAAGTCATTGCTCAACTTGAATTGTGGAAGGAGAAGGGTTCTGGCAAGTATGAGAAGAAGGTTTATGTTTTGCCAAAGCACCTTGATGAGAAAGTGGCTGCTCTCCACCTTGGCAAGCTTGGAGCTAGGCTCACCAAGCTTACCAAAGACCAGGCTGATTACATCAGTGTGCCCGTTGAGGGTCCATACAAGCCTGCTCACTACAGGTACTGA 1458 0.5528 MALLVEKTSSGREYKVKDMTQADFGRMEIELAEVEMPGLMSCRTEFGPSKPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTERALDWGPDGGPDLIVDDGGDTTLLIHEGVKAEQVYEKTGQFPDPASSDNAEFQIVLTIIRDGLKTDPKRYHKMKDRLVGVSEETTTGVKRLYQMQANGSLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAAMKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSEADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWLFPDTNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKGSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQADYISVPVEGPYKPAHYRY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00507 485 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 262 279 IPR020082 -
Pumo1g00507 485 NCBIfam adenosylhomocysteinase 14 477 IPR000043 -
Pumo1g00507 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 240 403 IPR036291 -
Pumo1g00507 485 Gene3D - 15 485 IPR042172 -
Pumo1g00507 485 FunFam Adenosylhomocysteinase 242 403 - -
Pumo1g00507 485 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 240 403 IPR015878 -
Pumo1g00507 485 Gene3D - 243 404 - -
Pumo1g00507 485 CDD SAHH 23 473 IPR000043 -
Pumo1g00507 485 Pfam S-adenosyl-L-homocysteine hydrolase 13 484 IPR000043 -
Pumo1g00507 485 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 12 485 - -
Pumo1g00507 485 SMART AdoHcyase_NAD_2 240 403 IPR015878 -
Pumo1g00507 485 SMART AdoHcyase_2 13 484 IPR000043 -
Pumo1g00507 485 PIRSF SAHH 2 485 IPR000043 -
Pumo1g00507 485 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 9 477 IPR000043 -
Pumo1g00507 485 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 IPR020082 -
Pumo1g00507 485 PANTHER ADENOSYLHOMOCYSTEINASE 6 485 IPR000043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00507 Pumo-Chr1 6731374 6732924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00507 K01251 - gmx:100787210 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00507 1 6731374 6732924 Pumo1g00507 1 6731374 6732924 ECH