Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00499 ATGTCGGCAATTCCTATCAGCTCCAGCTATGCTTCCACCTTTTCTTATTCTGCGCATGCGCTTCCTTTTTTCTTTGCTCGCAACAACTTCGCCAGGATCAATTTTCATCGACCTGTCTTTTGCCAATTTCAATCCGAGACAGAGAAACCGCTAACAAGGAGGTGCTCCCCCTTTCTAGAAAGTTCATTAGTCTCTTGTAATGGTGTTGTGGCCCCAGATGAGTGGAAAGCTGTTCCTGATATTTGGAGATCTTCTGCCGAGAAGTACGGTGATAAAGTAGCATTAGTAGATCCGTATCATGATCCTCCTTCAACTATGACATATAAACAGTTGGAGGATGCTATATTGGACTTTGCTGAAGGGTTGAGAGTTATTGGAGTAAGACCCAATGAGAAACTTGCGCTTTTTGCTGATAATTCATGTCGCTGGCTTGTAGCAGATCAAGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAATTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTTTAATCGGATTGCAAAACTGTTTTATTTGAAGGCTTCAATGAGATTTATTATTCTGCTGTGGGGAGAAAAATCAGGCCTGGTCAGTGAAGGAGACAAGGAGGTGCCTGTCTTTACTTTCACAGAAGTCATACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAAGCACTATATGTATGAAGCAATCAAATCTGATGACATTGCTACTCTTGTATACACAAGTGGAACTACTGGAAATCCGAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATAAAAAACTTAGGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGCTGCCTTCCTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTCTCCTGCGGTGTTGAACAAGTATACACAACTGTGAGAAACTTAAAGGATGATTTGGGACGTTATCAGCCACATTACTTGATTTCTGTTCCTTTAGTTTATGAAACTTTATACAGTGGGATCCAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAGCTTGTCGCATTCACATTCATAAGGGTCAGCTTAAGGTACATGGAGTGTAAGCGTATTTATGAGGGTAAATGCCTAACAAAGGATCAGAAGCCGCCGTCCTACCTCCATTCAATGTTGGACTGGTTATGGGCAAGAGTTATTGCCACAATATTATTTCCAGTTCATTTGCTGGCGAAGATACTTGTCTACCGTAAAATTCATTCAGCTATTGGAATTTCAAAGGCTGGAATAAGTGGTGGTGGTAGCTTATCTTCTCATGTGGATAGATTTTTTGAGGCTATTGGTGTGAATGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCTCGACGGCTTAGTTGTAATGTTATTGGGTCTGTTGGGCATCCAATTAAGCATACAGAATTCAAAGTCATAGATTCTGAGACTGATGAAGTTCTTCCACCTGGTTCAAAGGGAATTTTAAAAGTCAGGGGCCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGCTGGCTGAATACTGGGGATATTGGTTGGATTGTTCCCCACCATTCAACTGGGCGGAGTCGTAATTCCAGTGGAGTAATTGTTGTGGATGGTCGTGCTAAGGACACTATTGTGCTTTCTACAGGTGAAAATGTTGAACCGGGAGAACTTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTGTTATTGGCCAGGATAAGCGACGTCTAGGGGCTGTAATTGTTCCTAACAAAGAAGAAATCTTAAAGGCAGCAAGGGAATCGTCAATTATAGATTCCAACAGTTCAGATGTCAGTCAGGAAAAAGTGACCAGCCTAATATATAAAGAATTAAGGACATGGACATCAGAGTCTCCATTTCAAATTGGGCCAATCCTTCTCGTAAATGACCCCTTCACGATTGATAATGGGCTAATGACACCAACCATGAAAATTCGAAGGGATAAAGTTGTGGCTCAATACGGGGACCAAATAGAGAATCTATACAAGTAA 2157 0.414 MSAIPISSSYASTFSYSAHALPFFFARNNFARINFHRPVFCQFQSETEKPLTRRCSPFLESSLVSCNGVVAPDEWKAVPDIWRSSAEKYGDKVALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPNEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMFNRIAKLFYLKASMRFIILLWGEKSGLVSEGDKEVPVFTFTEVIHLGQESRRVLFDSLDNRKHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLGDIVPAEVGDRFLSMLPSWHAYERACEYFIFSCGVEQVYTTVRNLKDDLGRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVAFTFIRVSLRYMECKRIYEGKCLTKDQKPPSYLHSMLDWLWARVIATILFPVHLLAKILVYRKIHSAIGISKAGISGGGSLSSHVDRFFEAIGVNVQNGYGLTETSPVIAARRLSCNVIGSVGHPIKHTEFKVIDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNKEEILKAARESSIIDSNSSDVSQEKVTSLIYKELRTWTSESPFQIGPILLVNDPFTIDNGLMTPTMKIRRDKVVAQYGDQIENLYK 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00499 718 Gene3D Luciferase; Domain 3 493 563 - -
Pumo1g00499 718 Gene3D - 586 714 IPR045851 -
Pumo1g00499 718 Gene3D - 73 391 IPR042099 -
Pumo1g00499 718 Pfam AMP-binding enzyme 84 591 IPR000873 -
Pumo1g00499 718 ProSitePatterns Putative AMP-binding domain signature. 265 276 IPR020845 -
Pumo1g00499 718 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 39 718 - -
Pumo1g00499 718 Gene3D - 449 492 - -
Pumo1g00499 718 SUPERFAMILY Acetyl-CoA synthetase-like 72 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00499 Pumo-Chr1 6605778 6622828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00499 1 718 Acyl Lipid Metabolism Gene Families AT3G23790 67.455 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00499 K01897 - gmx:100782583 1350.5