Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00498 ATGGTGTCGTCTGGCTCTTTGATCTCTCATTCCTTCAACTGCATTCCCCTTCCAATCCCAAACACTTCACATTTTGTTCGCCGCAACAACAACAACCCCCTTCCATGTCAGTGCCCACTCTCTCCCCATCCTTCACACTCACATTCCCTTCGTTTTAGTTTACCATGGGGGAGAGAGTCACCAACATCAAGCACCAGGATACGTGCTTCAATTACAGATGTTTCAGTGGATGTAGCTGTGGAGGAGAAACGGCTTCCCAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGAACCTGTGTGGCAAACCCCTCCAGAATAAAGAATGTTGCAGACATAATTATTAATGATGATTCTGAGAGGAAATTGGTTGTGGTCTCTGCTATGTCAAAGGTGACCGATATGATGTACGATCTTATCCACAAGGCTCAATCTCAAGATAAGTCTTATGTTTCTGCACTGGATGCTGTTTTGGAAAAGCACAGCTCAACCGCACATGACCTACTTGCTGGAGATGATCTTGCTACTTTCTTATCACAGTTGCATCAAGACATCAGTGACCTCAAGTCAATGCTTCAAGCCATATACATAGCTGGTCATGCAACAGAATCTTTTACCGACTTTGTTGTGGGACATGGGGAGTTATGGTCTGCACATATATTGTCTTTAGTGATTAAGAAAAATGGGATTGACTGCAAATGGATGGATGCGAGGGAAGTCCTTATTGTAAATCCTACTCGTTCTGATCAAGTTGATCCTGACTACTTGGAATCTGAACGAAGACTTGAGAAATGGTACTCTCTAAATCCATCTAAGGTAATCGTTGCCACAGGATTCATTGCAAGCACACCTCAGAACATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCGGCAGCAATCATGGGTGCTCTGTTTAGGGCTCGTCAGGTTACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTGGTGATGCTGTGATTTTGAAGACATTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCCAATGTCTTACATCCACGCACAATAATTCCAGTTATTGGATATGGCATACCCATTATAATAAGGAATATTTTCAACCTCTCTTCTTCTGGAACAAAGATCTGTCATCCTTCTATTATTGGAAATGAAGATAGTCAGATATTAAAAAATTATGTCAAAGGCTTTACAACAATTGACAACTTGGCACTTGTAAATGTAGAAGGAACCGGAATGGTTGGTGTTCCAGGTACAGCTAGCGCTATTTTTGGTGCAGTAAAAGACGTTGGAGCTAATGTTATTATGGTATCTCAGGCCAGTAGTGAGCATTCTGTGTGCTTTGCTGTGCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGCGTTGCAGTCTGTATTTCATGGCGCTTTGGATGCTGGCCGTCTTTCTCAGGTTGCAATCATTCCAAATTGTAGTATTTTGGCAGCTGTCGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGATGCATTGGCTAAGGCAAACATAAATGTCCGTGCTGTAGCACAAGGTTGTTCTGAGTACAACATTACCGTAGTTGTTAAGCGAGAGGATTCTATAAAGGCTTTACGGGCTGTTCATTCCAGATTTTATCTCTCAAGAACCACAATAGCAATGGGCATTATTGGGCCTGGCTTAATTGGAAGCACACTGCTGGACCAGCTATGCGATCAGGCTGCGAATCTGAAAGAAGAATTTAACATTGATTTGCGTGTAATGGGCATCATGGGTTCAAAGTTGATGCTCCTTGATGATGATACGGGCATCAACTTAGTTAAATGGAGAGAACTGCGAGAAGAAAAAGGAGAATTGGCTAATTTGGATAAATTTGTTCAACATGTGCATGGAAATCATTTTATACCAAACACTGTGTTAGTGGACTGCACAGCCGACTCCGTTATTGCAAGCAATTACGATGACTGGCTGCACAAAGGAATACATGTGATCACTCCCAATAAGAAGGCAAATTCAGGACCACTTTATGAGTATTTGAGATTAAGAGCTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGGGCTGGTCTTCCAATTATCAGCACTTTACGTGGCCTTCTCGAGACTGGTGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAAGATGGCCGGGTTTTTAGTGAGGTGGTAGCTGAAGCTAGGGATGCAGGGTATACCGAGCCCGATCCAAGGGATGACCTGTCTGGAACTGATGTTGCTAGAAAGGTGATAATACTTGCAAGGGAATCAGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTGAAAATCTTGTGCCAGAACCATCAAGAGGTAGTACATCAGCTGAAGAGTTTATGCAACAATTGCCAAAATTTGACCACGAATTAACAGAGAAATTAAAAGATGCGGAGAGTGCTGGAGAAGTCATGAGATACGTGGGAGTGGTGGACGTGACTAATAAAAAAGGAGTGGTAGAGCTGAGAAGATACAAGAAGGATCATCCATTTGCACAATTATCAGGATCAGATAATATTATCGCATTCACAACAAGAAGGTATAAAAACCAGCCTCTGATAGTTCGTGGACCTGGAGCTGGTGCCCAAGTCACAGCTGGCGGAATATTCAGTGACATTTTACGACTTGCCTCATATCTTGGTGCTCCATCATAG 2766 0.4244 MVSSGSLISHSFNCIPLPIPNTSHFVRRNNNNPLPCQCPLSPHPSHSHSLRFSLPWGRESPTSSTRIRASITDVSVDVAVEEKRLPKGETWSVHKFGGTCVANPSRIKNVADIIINDDSERKLVVVSAMSKVTDMMYDLIHKAQSQDKSYVSALDAVLEKHSSTAHDLLAGDDLATFLSQLHQDISDLKSMLQAIYIAGHATESFTDFVVGHGELWSAHILSLVIKKNGIDCKWMDAREVLIVNPTRSDQVDPDYLESERRLEKWYSLNPSKVIVATGFIASTPQNIPTTLKRDGSDFSAAIMGALFRARQVTIWTDVDGVYSADPRKVGDAVILKTLSYQEAWEMSYFGANVLHPRTIIPVIGYGIPIIIRNIFNLSSSGTKICHPSIIGNEDSQILKNYVKGFTTIDNLALVNVEGTGMVGVPGTASAIFGAVKDVGANVIMVSQASSEHSVCFAVPEKEVKAVAEALQSVFHGALDAGRLSQVAIIPNCSILAAVGQKMASTPGVSATLFDALAKANINVRAVAQGCSEYNITVVVKREDSIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLCDQAANLKEEFNIDLRVMGIMGSKLMLLDDDTGINLVKWRELREEKGELANLDKFVQHVHGNHFIPNTVLVDCTADSVIASNYDDWLHKGIHVITPNKKANSGPLYEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRVFSEVVAEARDAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPSRGSTSAEEFMQQLPKFDHELTEKLKDAESAGEVMRYVGVVDVTNKKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYKNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00498 921 Pfam Homoserine dehydrogenase 713 911 IPR001342 GO:0006520
Pumo1g00498 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic 618 741 - -
Pumo1g00498 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 90 387 - -
Pumo1g00498 921 NCBIfam aspartate kinase 91 555 IPR001341 GO:0004072|GO:0008652
Pumo1g00498 921 ProSitePatterns Homoserine dehydrogenase signature. 759 781 IPR019811 GO:0006520
Pumo1g00498 921 Gene3D - 91 386 IPR036393 -
Pumo1g00498 921 Gene3D - 563 913 - -
Pumo1g00498 921 SUPERFAMILY ACT-like 482 571 IPR045865 -
Pumo1g00498 921 CDD AAK_AK-HSDH 91 385 IPR041743 -
Pumo1g00498 921 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 713 898 - -
Pumo1g00498 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 724 895 - -
Pumo1g00498 921 PANTHER - 74 921 IPR011147 GO:0004072|GO:0004412|GO:0009067
Pumo1g00498 921 SUPERFAMILY Carbamate kinase-like 92 386 IPR036393 -
Pumo1g00498 921 ProSitePatterns Aspartokinase signature. 93 101 IPR018042 GO:0004072|GO:0008652
Pumo1g00498 921 ProSiteProfiles ACT domain profile. 497 574 IPR002912 -
Pumo1g00498 921 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 560 735 IPR036291 -
Pumo1g00498 921 Gene3D Dihydrodipicolinate Reductase; domain 2 724 895 - -
Pumo1g00498 921 Pfam ACT domain 490 553 IPR027795 -
Pumo1g00498 921 Gene3D - 398 557 - -
Pumo1g00498 921 CDD ACT_AKi-HSDH-ThrA-like_1 411 490 - -
Pumo1g00498 921 Pfam Homoserine dehydrogenase, NAD binding domain 568 705 IPR005106 GO:0016491|GO:0050661
Pumo1g00498 921 ProSiteProfiles ACT domain profile. 416 485 IPR002912 -
Pumo1g00498 921 SUPERFAMILY ACT-like 400 475 IPR045865 -
Pumo1g00498 921 CDD ACT_AKi-HSDH-ThrA_2 492 557 - -
Pumo1g00498 921 Pfam Amino acid kinase family 92 373 IPR001048 -
Pumo1g00498 921 Pfam ACT domain 420 474 IPR002912 -
Pumo1g00498 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 399 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00498 Pumo-Chr1 6583173 6594409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00498 K12524 - gmx:548017 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00498 1 6583173 6594409 Pumo1g00498 1 6583173 6594409 ECH