Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00494 ATGGAAGAGATTGCACGTGCGTTGCTTGATTCTGGGTATCCCTTCTTATGGGTCATTAGAGAAAGTTATGGAAAGCAAGAGCTGAGCTGCAGAGAGGAGTTGGACCAGAGGGGGAAGATTGTGAAATGGTGTTCTCAGGTGGAGGTTCTGTCGCATTGTTCCATAGGTTGTTTTGTAACACATTGTGGATGGAATTCGACTATGGAAAGTTTGGCTTCGGGGGTTCCTATGGTGGCTTTTCCGCAGTGGACAGACCAAGGGACGAATGCAAAGCTAGTGCAAGATGTGTGGAAGACGGGGATGAGGGTGGATGATAAGGGGAATGAGGAGGGGATAGTGGAAGCTCAAGAGATTAGCAAGTGTTTGGAAGCGATCATAGGGAATGGAGGAAAAGGACAGGAATTGAGAAAAAATGCTGAGAAATGGAAATGCTTGGCCAGAGAAGCCGTGAAGGAAGGAGGCTCTTCGGATAGCAATATGAGAACTTTTCTCGACCATGTTGCAAAATTTGGACAGCCTGGTTTGATGTAA 531 0.467 MEEIARALLDSGYPFLWVIRESYGKQELSCREELDQRGKIVKWCSQVEVLSHCSIGCFVTHCGWNSTMESLASGVPMVAFPQWTDQGTNAKLVQDVWKTGMRVDDKGNEEGIVEAQEISKCLEAIIGNGGKGQELRKNAEKWKCLAREAVKEGGSSDSNMRTFLDHVAKFGQPGLM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00494 176 ProSitePatterns UDP-glycosyltransferases signature. 43 86 IPR035595 -
Pumo1g00494 176 Gene3D Glycogen Phosphorylase B; 1 148 - -
Pumo1g00494 176 Gene3D Glycogen Phosphorylase B; 149 160 - -
Pumo1g00494 176 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 2 100 IPR002213 GO:0008194
Pumo1g00494 176 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 2 159 - -
Pumo1g00494 176 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 168 - -
Pumo1g00494 176 CDD GT1_Gtf-like 1 149 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00494 Pumo-Chr1 6542224 6542837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00494 1 164 Glycosyltransferase AT1G05530 52.542 8.04e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00494 - - gmx:100800222 292.737