Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00483 ATGGCCGCGTGTGGCTATATATCTGCTGCCAACTTTAATTATCTCGTTGGCGCCAGAAACTTATCCAAATTCGATTCTTCGGATGCCACAATTTCGTTATCATTTGCTGCCAGCGACTCAATGGGTCTTTGTCTGCGACCCGCTCCAATTCGTGCTCCTATGAGGAACCATGTCTCTCCCTTGCGTGTCGTTTGCGTCGATTATCCACGCCCAGAGCTCGAAAACACCGTTAATTTCGTCGAAGCTGCTTACTTGTCTTCCACCTTTCGTGCTTCTCCGCGTCCACTAAAACCCTTGAACATCGTTATTGCTGGTGCAGGATTGGCTGGTTTATCAACTGCAAAATATTTGGCTGATGCTGGGCATAAACCTATATTGCTGGAAGCAAGAGACGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGATGAGGATGGAGACTGGTATGAGACAGGCCTACACATCTTCTTTGGGGCATACCCTAATGTGCAGAACCTATTTGGAGAACTTGGCATTAATGATCGGTTACAATGGAAGGAGCATTCTATGATTTTTGCTATGCCAAATAAGCCTGGAGAGTTTAGTCGATTTGATTTTCCGGAAGTCCTTCCTGCCCCATTAAATGGAATATGGGCAATATTGAGGAACAATGAGATGCTGACATGGCCAGAGAAAGTCAAATTTGCAATTGGGCTTCTGCCAGCTATGCTTGGTGGACAGCCATATGTTGAGGCTCAAGATGGTCTTTCTGTTAAAGAATGGATGAGAAAGCAGGGCGTACCTGAACGAGTAACTGATGAGGTGTTCATAGCTATGTCAAAGGCACTAAACTTCATCAATCCTGATGAACTTTCAATGCAATGTATATTGATTGCTTTAAACCGATTTCTTCAGGAGAAACATGGTTCTAAGATGGCCTTTTTGGATGGCAATCCCCCCGAAAGACTTTGTATGCCAGTAGTTGATCATATTCAGTCCTTGGGTGGTGAAGTCCATCTCAATTCGCGCATTCAAAAAATTGAGCTAAATGATGATGGAACAGTGAAGAGCTTCTTACTAAATAATGGGAAGGTGATGGAAGGGGATGCTTATGTGTTTGCAACTCCAGTGGATATTCTGAAGCTTCTTCTACCCGACAACTGGAAAGGGATTCCGTATTTCCAGAGATTGGATAAATTAGTTGGAGTTCCGGTCATAAATCTTCACATATGGTTTGACAGAAAACTAAAGAACGCATATGATCACCTTCTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCAGTAACTTGCAAGGAATATTATAGCCCAAACCAGTCTATGTTAGAGTTGGTTTTTGCACCAGCTGAAGAATGGATTTCACGTAGTGATGAAGATATTATTCAAGCCACAATGTCTGAGCTTGCCAAACTCTTTCCTGATGAAATTTCTGCAGACCAAAGCAAAGCAAAAATTGTTAAGTACCATGTTGTTAAAACACCAAGGTCGGTTTACAAAACTGTTCCAAATTGTGAACCTTGTCGTCCCTTACAAAGATCTCCTATAGAAGGTTTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGTGCTGTTCTTTCTGGGAAGCTTTGTGCACAGGCTATTGTACAGGATTCTGAGCTACTTGCTACTCGGGGCCAGAAAAGAATGGCTAAAGCAAGTGTTGTTTAA 1713 0.4244 MAACGYISAANFNYLVGARNLSKFDSSDATISLSFAASDSMGLCLRPAPIRAPMRNHVSPLRVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLKPLNIVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVKEWMRKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINLHIWFDRKLKNAYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDEDIIQATMSELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASVV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00483 570 Gene3D - 98 559 IPR036188 -
Pumo1g00483 570 PANTHER PROTOPORPHYRINOGEN OXIDASE 89 558 - -
Pumo1g00483 570 NCBIfam 15-cis-phytoene desaturase 101 550 IPR014102 GO:0016117|GO:0016166
Pumo1g00483 570 Pfam Flavin containing amine oxidoreductase 108 549 IPR002937 GO:0016491
Pumo1g00483 570 SUPERFAMILY FAD/NAD(P)-binding domain 98 551 IPR036188 -
Pumo1g00483 570 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 96 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00483 Pumo-Chr1 6415804 6422787 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00483 K02293 - gmx:100127420 1122.46