Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00450 ATGGAGTTTTCTCAAGATGATTTTGACCGGCTACTGTTATTCGAACACACGCGAAAGACCGCTGAAGCAAATTACGCAGAGAATCCTCTAGACGCTGATAATCTGACCAAGTGGGGGGGAGCTTTGATCGAGTTGTCGGCATTCCAAAATCCTAGGGATTCCAAGGCGATGATTGATGATGCCCTTTCGAAGCTGGAGGAGGCTTTGCTGATCAATCCAACAAAGCATGACACTTTTTGGTGCTTGGGAAATGCAAACACATCTTATGCATTTCTAATCCCTGATATCAGTGAGGCAAAGGGTTATTTTGACAAGGCACTTGAGTATTTCCAGAAAGCTGTGGATGAGGATCCTGAGAATGACCTCTATAGAAAGTCTTTGGAAGTTGCCATGAAGGCCCCAGAACTACACATGGAGATCCATAAAAATGGGCTTGGTCTGATGAGTAATGCGGGATCCTCTGCTACTTCAAAAGGAAAGGAATCTAAAAGGCAGAAGACCAATGACTTAAAGTATGACATATTTGGATGGATTATTCTTGCAGTGGGTATAGTAGCATGGGTGGGAATGGCCAAATCTAACATTCCCCCGCCACCTCCAAGATAA 606 0.4422 MEFSQDDFDRLLLFEHTRKTAEANYAENPLDADNLTKWGGALIELSAFQNPRDSKAMIDDALSKLEEALLINPTKHDTFWCLGNANTSYAFLIPDISEAKGYFDKALEYFQKAVDEDPENDLYRKSLEVAMKAPELHMEIHKNGLGLMSNAGSSATSKGKESKRQKTNDLKYDIFGWIILAVGIVAWVGMAKSNIPPPPPR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00450 201 ProSiteProfiles TPR repeat profile. 87 120 IPR019734 GO:0005515
Pumo1g00450 201 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 201 IPR010547 GO:0005742|GO:0045040
Pumo1g00450 201 SUPERFAMILY TPR-like 22 130 IPR011990 GO:0005515
Pumo1g00450 201 Gene3D Tetratricopeptide repeat domain 1 151 IPR011990 GO:0005515
Pumo1g00450 201 Pfam Plant specific mitochondrial import receptor subunit TOM20 8 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00450 Pumo-Chr1 6148414 6151747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00450 - - gmx:100775949 389.808