Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00440 ATGCCACAGCCAGAAAAACCGCTCGGTAACAACCTTCCAATAATTCGCATTCCAGGAGACGGTAGATGTTTGTTTAGATCTGTGGTCTATGGTGCATGCCTCAGATCAGGGGAACCATCTCCAAGTCTTAGCAGACAAAAGGAACTCGCAGATGAACTCAGAGCCAAAGTTGTGGATGAATTCATCAAGAGGAGGGCAGACACTGAGTGGTTTCTAGAAGGTGACTTTGACACCTATACAGTACAGATGCGAAAGCCTCACATATGGGGAGGAGAACCTGAACTTCTTATGTCTTCACATGTTTTACAGATGCCAATAACGGTGCTCATGCAGGATAAGAATTCGAGTAACCTTAAAGTTATAGCTGAATACGGTCAGGAGTATGGGAGGGATAATCCTATTCGAGTGGTCTATCATGGTTATGGCCACTACGATGCATTATTGAAGAGTTCCACCGGTTATCTGCAGTCTTAG 474 0.4473 MPQPEKPLGNNLPIIRIPGDGRCLFRSVVYGACLRSGEPSPSLSRQKELADELRAKVVDEFIKRRADTEWFLEGDFDTYTVQMRKPHIWGGEPELLMSSHVLQMPITVLMQDKNSSNLKVIAEYGQEYGRDNPIRVVYHGYGHYDALLKSSTGYLQS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00440 157 SUPERFAMILY Cysteine proteinases 11 149 IPR038765 -
Pumo1g00440 157 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 17 150 - -
Pumo1g00440 157 Pfam OTU-like cysteine protease 18 144 IPR003323 -
Pumo1g00440 157 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Pumo1g00440 157 FunFam OTU domain-containing protein 3 153 - -
Pumo1g00440 157 Gene3D - 4 155 - -
Pumo1g00440 157 CDD OTU_plant_OTU4-like 11 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00440 Pumo-Chr1 6051129 6053194 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00440 K18342 - gmx:100792132 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00440 1 6051129 6053194 Pumo1g00440 1 6051129 6053194 ECH