Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00419 ATGGCACATGCTTTATCCTCAAATCTGGCTCTTAACTTTCCCACATCGAGCTATGTTCGTCCCTCCAGACCAACCCAGTTGAAGCCCGTGAGGGTCATGAAGGGTGATGCAAGAGAAAAGCTCGATCACGTGCCAAAACACAACAAGCACCACCCCCTCCCCAAAAACAGAGTTGCCCCTACCCCGCCCATAGGGTTGTGGGACCGGTTTCCTACGGCAAGGACAGTGCAAGAGATGATGGAGACCATGGAGAGGTTGGTGGAGGACCCTTTTGCGTTTAGCACACTGGAGTGGCCTTCATCACCCCTTCCTAGTGAGGGAGTTGGAGGGTATCGAAGAAGGGGAAGGGCACCATGGGAAATTAAAGAGTGTGAGAATGAATACAAGATGAGGTTTGATATGCCTGGGATGAACAAGGAGGATGTGAAGGTGTGGGTGGAGGAAAAGATGCTGGTGGTCAAGGCTGAGAAGGCACCAAAGAAGAAGCAAGAGAATGAGATTATGGAACAACAAGAAGAGGAATGGTCTGCTAATAGTTATGGTAGGTATAGCAGTAGAATTGCTTTGCCTGATAATGTGCAGTTTGAGAATATTAAGGCAGAGGTTAAGGATGGTGTGCTCTACATAACCATACCCAAGGCTACTTCCTACTCCAACATCCTTGATATCCAAGTTCAATGA 681 0.4816 MAHALSSNLALNFPTSSYVRPSRPTQLKPVRVMKGDAREKLDHVPKHNKHHPLPKNRVAPTPPIGLWDRFPTARTVQEMMETMERLVEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEIKECENEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKQENEIMEQQEEEWSANSYGRYSSRIALPDNVQFENIKAEVKDGVLYITIPKATSYSNILDIQVQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00419 226 CDD ACD_sHsps-like 120 213 - -
Pumo1g00419 226 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 21 226 IPR044587 GO:0009408
Pumo1g00419 226 MobiDBLite consensus disorder prediction 43 64 - -
Pumo1g00419 226 Pfam Hsp20/alpha crystallin family 120 225 IPR002068 -
Pumo1g00419 226 Gene3D - 66 225 IPR008978 -
Pumo1g00419 226 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 110 226 IPR002068 -
Pumo1g00419 226 SUPERFAMILY HSP20-like chaperones 104 216 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00419 Pumo-Chr1 5874108 5875137 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00419 K13993 - gmx:100811966 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00419 1 5874108 5875137 Pumo1g00419 1 5874108 5875137 ECH