Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00402 ATGGGTGCCGACGGCGTGGCTGCGGCGGAGGCGCTTCTGGCGTCTGGTCGGAGCTCGGAGAAGCTGAGTCTTCCATCACTCCAATCCAAAATGAAGTGCGATCCAGAAGGCTACGAATCGGAGCTACTCCTTCTCTATAACCAATTCAACTCCTCGCTCGAACTCTTTCAGAAACAAGCCGCCATGAACTTCACCTCAATCACCGGCATCGGCAGCGACCCCACCGTCGCCAAGGACCTCGGCGACAGGGCCATGTTCCTCGCCCACGTCACTCCTTTCTACCCCAAACACCTCGCCGATTTCCCCAACAAACTCGCCGATTTACTTCGCTGCGCCGCGCGCACGCTGCCTTCTGGACTTCGCTGCCACCTCACCCACGCTCTCATCCTCCTCTCTAATCGAAAGATTGTTGATATTGGAGAAACGCTGTCGTTGTTCATGGACCTTCAAACCCTAGGTGACAGAACGCTGAAGAAGTTGGCGTTTGATCATCTTGTTCATAGTATAAGGCGTATGAACCAAAAGCATAAGAACGAAGCTAAGAACCGAGCGCTTCAGAATGTCTTGTTTGACTTGCTTCAGAAAGAGGCTGAAGAGCCGGCCAAGAGGGCGCTCGTGACTCTATGTGAGCTTCACAGGAGAAAGGTGTGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCATCATCTAGGATTATGATAGCAGCTTTATCATTTCTGCTTGATTATGAGAAGATTCAAGATGATGATGATAGTGATGATTCGGACAGTGATGATGAAAAGACTGAATCACCTCAAGTTGTCCTTAGCAGGGAGACAGTTTATAAGGCAAGCCACCAAGGTACAGCAGCGAGCAAAAAGAAGAAGAAAGCAAAACTACAACGTGCCATACGCAGCATGAAAAGGCAGCAGCGCGTGTCGTCTGATAGGAGCAAAAACAGTTATTATTCCCCACTTAACCATCTGAAAGATGCTCAGGGTTTTGCCGAGAAGCTGTTCTCACGTCTTAGGAATTGTAATGAACGATTTGAGGTAAAGATGATGATCTTGAAATTGATTGCTCGAACAGTTGGACTTCACCAGTTAATTTTGCTAGAGTTCTATTCTTTTCTTCAGAAATATATTCAGGTATCATTTGATAAGTTTGGTGAAATTTGGTATTCTGTTTATAACTTAAGTGTGACAATTGTGATATATGCATTGTGCAATCAGCCACATCAACGTGACATTACAAATTTGCTTGCAGCAGTGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTCAAACAAATAGTAAATCAATTTGTACATGACCGTTCACGTCCAGAGGCTATTACTGTTGGAATAAATGCAGTCAGGGAGATATGCATGCGCATGCCATTGTTAATGAATGAAGACTTACTACAAGACCTTGCACTATATAAGAAATCACGTGAGAAGGCAGTTTCAGTAGCAGCTCGATCTCTGATTGGGTTATTCAGAGAGGTTTGCCCCTCATTGCTAGTTAAGAAGGACCGTGGGCGGCCTATTGACCCTAAGGCAAGACCAAAGGCCTATGGAGAGGTCAATGTTGCGACTGACATTCCTGGTGTTGAGTTATTGCAGACTATTGACAATGATGATGAGCAGGAGAGTGATCATTCTGATGATTCTGCATGTAGTGCCTCTGACAATGAACAGGAAAATGATTTGATGAGTATAAATGATGACGATGACGACGATGATGAGAACCAGTTATGTAGTGATGATCCTGGAAGTGATGATGATGATGAAGCCAAAGATAGTGATGTTATATCAGAAGATGAAGATGAGAGAAGTTCTGATTACGAAGATGGTGATAGTGATGCTGATGATGATGAAGTTAAGGGGGATGACATTGAAGACAGTGAACAGGCTGATGAAGAGGATAGTGATGTTTCGGAACATGAAGAAGAAAGTGATCTGCATTCTTTAAGTGATGATGGACATGTGGAGACACAAAGTACATTGAAAGACTCAGCAAAAAAGAGGAAGTTTACTGATTTTAATGGTCAACTTATAGCTGCTGATACAAGTCTCCGAGCTTTGAAGAAATTGGCAGGGAGAAAAATGGGGGATGTCCTACCAGAATCTAACGATGGAATTCTTTCTAATGAAGACTTCCAGAGGATCAAAGAACTAAAGGCAAAAAGAGAGGCAAAAAATGCATTGGCTCAGCAAGGGCTAGCGAAGTCAGCTGCAATTAAGGTTCCAAGCTCTGATCAATTAAGTCTAAAGCGAGTGGATGGTACCATGCTTGAAGCTCATGTAAGGAAAAAGTTGAGCAAGGATGAAAGGTTGGCATTGGTTAGAGCAGGGAGGGAGGAAAGAGGAAAATATCATGCTCGAACTGCTGTGAAACAGAACAAGACGGGTGGCCTAAGCAACCGACAAAAGGAACACAAGAAGAAAATGCCCTTGGCTGCAAAGAGAGATAAGGTATCAAGAACTCGGATAGAGAAAAAGAGAAAAAATCAGCGATCTGGCAAACAGTTCCGGGGGAAGAAAGCGTGGAAGCAATAA 2574 0.4437 MGADGVAAAEALLASGRSSEKLSLPSLQSKMKCDPEGYESELLLLYNQFNSSLELFQKQAAMNFTSITGIGSDPTVAKDLGDRAMFLAHVTPFYPKHLADFPNKLADLLRCAARTLPSGLRCHLTHALILLSNRKIVDIGETLSLFMDLQTLGDRTLKKLAFDHLVHSIRRMNQKHKNEAKNRALQNVLFDLLQKEAEEPAKRALVTLCELHRRKVWFDERTANAICTASFHPSSRIMIAALSFLLDYEKIQDDDDSDDSDSDDEKTESPQVVLSRETVYKASHQGTAASKKKKKAKLQRAIRSMKRQQRVSSDRSKNSYYSPLNHLKDAQGFAEKLFSRLRNCNERFEVKMMILKLIARTVGLHQLILLEFYSFLQKYIQVSFDKFGEIWYSVYNLSVTIVIYALCNQPHQRDITNLLAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICMRMPLLMNEDLLQDLALYKKSREKAVSVAARSLIGLFREVCPSLLVKKDRGRPIDPKARPKAYGEVNVATDIPGVELLQTIDNDDEQESDHSDDSACSASDNEQENDLMSINDDDDDDDENQLCSDDPGSDDDDEAKDSDVISEDEDERSSDYEDGDSDADDDEVKGDDIEDSEQADEEDSDVSEHEEESDLHSLSDDGHVETQSTLKDSAKKRKFTDFNGQLIAADTSLRALKKLAGRKMGDVLPESNDGILSNEDFQRIKELKAKREAKNALAQQGLAKSAAIKVPSSDQLSLKRVDGTMLEAHVRKKLSKDERLALVRAGREERGKYHARTAVKQNKTGGLSNRQKEHKKKMPLAAKRDKVSRTRIEKKRKNQRSGKQFRGKKAWKQ 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00402 857 MobiDBLite consensus disorder prediction 574 653 - -
Pumo1g00402 857 MobiDBLite consensus disorder prediction 811 832 - -
Pumo1g00402 857 Coils Coil 288 308 - -
Pumo1g00402 857 MobiDBLite consensus disorder prediction 654 679 - -
Pumo1g00402 857 Pfam NUC130/3NT domain 86 137 IPR012977 -
Pumo1g00402 857 SUPERFAMILY ARM repeat 166 529 IPR016024 -
Pumo1g00402 857 MobiDBLite consensus disorder prediction 789 857 - -
Pumo1g00402 857 PANTHER HSDA/SDA1-RELATED 19 382 IPR027312 GO:0000055|GO:0042273
Pumo1g00402 857 MobiDBLite consensus disorder prediction 833 857 - -
Pumo1g00402 857 Pfam SDA1 474 853 IPR007949 -
Pumo1g00402 857 MobiDBLite consensus disorder prediction 551 679 - -
Pumo1g00402 857 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00402 Pumo-Chr1 5708276 5713514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00402 K14856 - gmx:100816774 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00402 1 5708276 5713514 Pumo1g00402 1 5708276 5713514 ECH