Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00401 ATGAGGCTTCGACTTCCCAGTTCAGCCGCCATGATTCATTCTAACTCTCTTCATAAACAGATCGTTTTAAAACCGAAACTGGGAAGTGAGGAGTTCACGCAGAAGGTACTCAACAGAAGATGGGCATTGCCAAGCCCCGAAACAAAAATTCACCAGCTAACACATACACAAGGTCCTAAATCTAATTTCTTGTTGAACACCCACCCAGCTTTTGGTGATGCCAATCGCGTGGACAAACAAAGCAAGTACTTTTATATCGTTCGGGATGATTTGTTGCACCCACTTGTTAATGGCAACAAAGCAAGGAAACTCGATGGACTACTTCCTCTGCTTCAACGTTACTCTGTCACCGATGTGGTTACATGCGGAGGTTGTCAGAGTGCTCACACAGCTGCTATTGCTGTTCTGTGTGCTGAGAGAGGAATTGTGTCACATCTGCTTCTTCGAGGAGAGCAGCCTGAAATCTTGACTGGCTATAACTTGATGTCTACAATGTACGGAAATGTCACTTATGTTCCGAGAACTATTTATGCCAACAGGGAAGAGATGCTAAAGAGCTATGCCGAGTCAGTGGCTGGTAACGATGGTTCTGTCTTATGGTTCGGCGATATCATTATAGCTTCAGCAACTGAATTGTCTACTTCTCCAAATTCTATGCAAATGGATGTAAGTAGAAGTGAGGGAAACCATCTACGAAAGATTTTAGTTGTCAATGAAGGTGCTGGTGATTCTGTTGCTCTACTAGGTGTTATTCGCTTAGTGCAATACTTGTCACAGAATCATTTACTTGGAAAACAAAGGCCCATGAAATTTGTTGTAGATGCTGGTACTGGCACAACAGCTGTTGGTTTAGGACTTGCAGCCCATTGCTTAGGACTCCCATGGGAGGTATATGCTGTCATGCTGGCTGACAAAATTGGAGGGTACAGAAAACAGGAGGAGCGTTTGATTTCTGAATTCAAGAAGCATTTTAACATTGAGTTTATTGACCACAATGTAAACAGACAAGATGCAGGGATTGTGAATTGGGTGGAACGTGGCCGTCCAAGAAAATTTGGTAATGTCTTGGAAGGGGAAGTGGAAGCATGTCAGCAAATTGCCCAACAAACTGGGATTTTGGTGGATCCTGTGTATACATTAGCTGCTTGGGAAACAGCAATGCTTCTCTCTAGCAACGAAGCTGAAGTGGTGTTGCTTCACACTGGAGGCACATTGGGTATGTTTGGGTTGGCCCAAAGGTACAAAAAATATTTTGGTATGCTTAAAAATGGACACAATCATTAA 1284 0.4322 MRLRLPSSAAMIHSNSLHKQIVLKPKLGSEEFTQKVLNRRWALPSPETKIHQLTHTQGPKSNFLLNTHPAFGDANRVDKQSKYFYIVRDDLLHPLVNGNKARKLDGLLPLLQRYSVTDVVTCGGCQSAHTAAIAVLCAERGIVSHLLLRGEQPEILTGYNLMSTMYGNVTYVPRTIYANREEMLKSYAESVAGNDGSVLWFGDIIIASATELSTSPNSMQMDVSRSEGNHLRKILVVNEGAGDSVALLGVIRLVQYLSQNHLLGKQRPMKFVVDAGTGTTAVGLGLAAHCLGLPWEVYAVMLADKIGGYRKQEERLISEFKKHFNIEFIDHNVNRQDAGIVNWVERGRPRKFGNVLEGEVEACQQIAQQTGILVDPVYTLAAWETAMLLSSNEAEVVLLHTGGTLGMFGLAQRYKKYFGMLKNGHNH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00401 427 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 84 415 IPR036052 -
Pumo1g00401 427 Gene3D - 212 417 IPR036052 -
Pumo1g00401 427 Gene3D - 99 201 IPR036052 -
Pumo1g00401 427 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 25 419 IPR027278 -
Pumo1g00401 427 FunFam D-cysteine desulfhydrase 2 mitochondrial 221 417 - -
Pumo1g00401 427 FunFam D-cysteine desulfhydrase 2, mitochondrial 99 200 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00401 K05396 - gmx:100801680 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00401 1 5704161 5708137 Pumo1g00401 1 5704161 5708137 ECH