Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00398 ATGCAACTTGATATTCTTATAAAGAAGCTCCTCCTTACACACGATCCAGATGGTCGCAGGCTGGATTCTGAGACAATGCTCCTTGCTGTTGGCAACATTATGTTTCATGCTTCCACAATAATAGGGGCTTTTAATTTATATTCTGCTTCCTTTCAGAAGAATGATATAACTGAAATTGAAACGATTGGTTGTAGTGAACCAGTAGGATTCATCATCACAAAAATATGCAAGATACTCTGCAAATGCTCTGGTGAAGGTGATATTAACTCAAGGATCATAAATTTGTTTGATTTGATAGGGAAGTATAGTTGGGATGCAAAAGTAGTTTTAGTGCTAGCTGCTTTTGCAGTAAGATATGGTGAATTTTGGCAACTTAAGCAGCTATATCGTGGTAATACTTTGGCAGCTTTAATTTCAAGTATTAAGCAGCTGCCCTACAACTTAAAGCCACTGAAGCTTCAAATCAAGGCATTGAGCTTGTTGGTTAAGACCATGATGGATGTGGCTATGTGTATCATTAAGTTTGAATACCTGCCCCTTCAACAAGTAGAGCCGGGAAATCATGTATTCCTTGTCACAAAGTCTCAAATATACGAAGCTGCATACTGGATCACCAGAAGCTGTTTAGCATGTTTTTCTCAAGTCATGGATTTCACAGCCAAAAAACATGAGCAAGTGTACTCAGATTCAACAATAATTGCTGCTTGGGAGCTTTCAAGTTTGGCCTATAGATTAAGTAACATATGCAGCAATCTCAGAAGACAGGTGGATCTGTGTCACGAAGAAATAGAGAGAAACTTGTATGGTAGGCTGTTGGATCTTGCTCGCCAGGAGCACGTTGATAATCAGAAGATTCTCACTTTATTTTTTCCTCCCAAGAATTACTTGCCATTGAAGGATTGCTCAACTGAAGTAAAGCTTGGTGTGTCTGAACTGAAAAATAAGATAGTTCTGTTGTTGATCTCAAAACCGCAGCTACTCAACCTGGTAGATATATTCTTACTGGTCCAGCAAACATGTGATCATCCTCTGAATGAGAGGTTGAGGGAGAGTTATAAGATTGTGTGGATTCCCCTTCCATCTTCTGATACATGGACTGAAGCTGAAGAGAGTAGTTTTAATTTTCTGTCAGATTCCTTGCCTTGGCATGCAGTTCGGAAACCAAGATTACTTAGCTCAGCAGTGGTGAAGTACATAAGGGAACAATGGAACTACAAGGAGGAGCCCATCATGGTAGCTCTAGATTCAAAAGGGAAGGTTACAAATTACAATGCTCTTGATATGATCAAGATTTGGGGACCCCAAGCATACCCCTTTTCGGCTTCAAAAGAGGAAGAGCTATGGCAAGACCAGAATTTGACAATGCAACTTTTGCTGGATGGCATCAATCCTCTCCTTGCTTACTGGGTTGAACAAGGCAAAAATATATGCCTTTATGGGAGTGAAAACTTGGTTTGGATCCAACAATTCAATGATAAGATAACCGAGGTCAAACGAGCAGGTCTGCAGCTGGAAACAATATATGTTGGTAATAGTCAGTTAGGTGAACATGTTAAGCAAATAATAGCAAGAAGTGGTGAAACAAATCTCAGTGATCCACTTTCCTTCACAAATGTGCAATACTTTTGGCTTCGGTTGGAGAGTATGAGAAGGTCTAAACTCAGACTAGGGAAGACACCAAGTTCAGATCATGTACTAGCAGAGTTGTCAGCTTTGCTTGACATGGATGATAGAGAGGAAGGTTGGGCTGTGATTGGATGTGAGGGTTCAACTGATCATATTTTTAGGCTTCAAGGGATGCAGGTGATGGAATTCTTAAGGAACTGTTCTGAGTGGAGAGAAAATATAACCAAGTTGGGATTGTTTGGTGCTCTAAGAAACTTCCTAGACCCCGATTTTGTTGAAGGGAGTTGCAATCACTCATACTTTGTTTCCTCTACAGAAAATGAAAGGCTAAGAGAAGGAACTGTAATTTGTCAAGTGTGCAAGCGTCCCATGAAGAAGTTTGTGGTGTACCAGCCATGA 2025 0.403 MQLDILIKKLLLTHDPDGRRLDSETMLLAVGNIMFHASTIIGAFNLYSASFQKNDITEIETIGCSEPVGFIITKICKILCKCSGEGDINSRIINLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLKQLYRGNTLAALISSIKQLPYNLKPLKLQIKALSLLVKTMMDVAMCIIKFEYLPLQQVEPGNHVFLVTKSQIYEAAYWITRSCLACFSQVMDFTAKKHEQVYSDSTIIAAWELSSLAYRLSNICSNLRRQVDLCHEEIERNLYGRLLDLARQEHVDNQKILTLFFPPKNYLPLKDCSTEVKLGVSELKNKIVLLLISKPQLLNLVDIFLLVQQTCDHPLNERLRESYKIVWIPLPSSDTWTEAEESSFNFLSDSLPWHAVRKPRLLSSAVVKYIREQWNYKEEPIMVALDSKGKVTNYNALDMIKIWGPQAYPFSASKEEELWQDQNLTMQLLLDGINPLLAYWVEQGKNICLYGSENLVWIQQFNDKITEVKRAGLQLETIYVGNSQLGEHVKQIIARSGETNLSDPLSFTNVQYFWLRLESMRRSKLRLGKTPSSDHVLAELSALLDMDDREEGWAVIGCEGSTDHIFRLQGMQVMEFLRNCSEWRENITKLGLFGALRNFLDPDFVEGSCNHSYFVSSTENERLREGTVICQVCKRPMKKFVVYQP 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00398 674 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 6 673 IPR039299 GO:0010088
Pumo1g00398 674 Pfam Sieve element occlusion C-terminus 442 673 IPR027944 -
Pumo1g00398 674 Pfam Sieve element occlusion N-terminus 4 278 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00398 Pumo-Chr1 5673676 5677771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00398 - - gmx:100819823 1215.68