Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00393 ATGGCGGAGCTCCGGCACTCTTCCTCCCTCGGCAGCCGAGCCTCCAATTCTCCCATGAAGCGCGACGCCGTCGGCGGCGGCGATTCCTCCCCTCTCATTCCCGACAACCACCTCGCCGACGACGATGAGCACGATCGCCACTCTTCCAAGGACCGCGACCGCCACCTCTGCTCCTTCTTCACCGACGACCCTAGGGTTTCGCCTCACCACTCCAGGATCTCTCTCTTTTTCACATTACTTCTTCTCCTCCTTGGTTTAGTCTTCGTATTCACAATCTTCAATAATCTCAATGCGCCTTACTTGTGTAAAAAAGATGGGATTGTTCTTCACTGCCCGCATGTTAAAGAATCGCCATCTCTTTGGGAAAATCCTTTCTCTTCCACAACATCTTGGAAGCCCTGTGCTGAGCGCGGGGATGGTGTTTTACCAGAACTTCCTCCTGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTGGCAAAAATAATGAATGCCACTCTTATTTTGCCTGTTTTGAAGCAGGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATTGACTACCTGAAGTATGATGTTCGTATTGTCCGTGATATCCCAAAATGGTTTACTGATAAATCAGAGCTATTTACTAGCATAAGACGGACTGTAAAAAACATTCCCAAATATGCACCGGCACAATTTTACATCGATAATGTTCTGCCCCGAATCAAGGAGAAGAAGATTATGGCTCTGAAACCCTTTGTTGACAGGCTGGGATATGACAATGTTCCTCCTGAAATCAACAAGTTGAGATGTAGAGTAAATTATCATGCGCTGAAATTTCTTCCTGATATAGAGCAGATGGCTAATTTACTAGCATCAAGAATGAGAAACCGAACTGGCAGTTCAAATCCTTACATGGCTCTGCATCTTAGATTTGAGAAAGGAATGGTGGGCCTATCATTCTGTGATTTTGTGGGGTCAAGAGAGGAGAAAGCCAAAATGGCGGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCATCTGTGGCAATTAGCTCTGCAGAAGCGAAAGGAAGGACGGTGTCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGAGCCATGGGCTATCCAAAGGAAACTCAAATTTACGTAGCTTCTGGACAGGTGTATGGTGGACAGAATCGGATGGCTCCACTAAGGAATATGTTCCCTAATCTGGTTACCAAGGAGGAATTGGCAACTAAAGAGGAGTTGGATGGTTTCAGAAAGCATGTGACAAGCCTGGCAGCTCTTGACTTCTTGGTGTGCTTGAAGTCGGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGTTGATCATCGGGGCACGTAGATACATGGGTCACCGTCTAAAATCAATTAAGCCTGACAAAGGGCTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTCCTTTTGTAGAAGATGTTGTTGTTACTCACCAGACACGAACGGGATTGCCAGAAGAGACTTTCCCTAACTACGACCTCTGGGAGAACCCTTTGACACCCTGCATGTGTAGAGCCTGA 1653 0.461 MAELRHSSSLGSRASNSPMKRDAVGGGDSSPLIPDNHLADDDEHDRHSSKDRDRHLCSFFTDDPRVSPHHSRISLFFTLLLLLLGLVFVFTIFNNLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWKPCAERGDGVLPELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPKWFTDKSELFTSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMANLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGSREEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00393 550 MobiDBLite consensus disorder prediction 35 50 - -
Pumo1g00393 550 Pfam GDP-fucose protein O-fucosyltransferase 154 486 IPR019378 -
Pumo1g00393 550 CDD O-FucT_plant 154 489 IPR024709 -
Pumo1g00393 550 Gene3D - 295 493 - -
Pumo1g00393 550 MobiDBLite consensus disorder prediction 1 50 - -
Pumo1g00393 550 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 96 549 - -
Pumo1g00393 550 PIRSF UCP009360 35 550 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00393 Pumo-Chr1 5619418 5626635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00393 120 549 Miscellaneous Gene Families AT1G22460 36.142 2.55e-94 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00393 - - gmx:100809112 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00393 1 5619418 5626635 Pumo1g00393 1 5619418 5626635 ECH