Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00390 ATGGGGATCATCACTCGCAGTTCTGCTGGTAGAAAACCAAGTGAAATTATGAGGTTTTTTGTGACAACTTTTATTGGTATAGTTTTCGGATTCTTTATAGGAGTATCAGTTCCAACATTGTCAATAACAAAGTTGAATCTCCCATCTGGCCTGCTTCCCTCCATTGATCTTTCTTACATCGAAGACAGATATACAGGTCGCCAGGCTTGGTCTTTTATAAATAATGGTAACAAAAGAAGTTCATCGCAAGTTCAATTATCAAATGATACATCAAAGATTTGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCAGGCATTGTTGAAGCTGAGTCAGACTTTTATTTGCGTAGATTGTGGGGTAAGCCCAGTGAGGATCTAACGTCCAAGCCAAATTACCTTGTAACCTTCACTGTTGGCTATGATCAGAAAAATAATATTGATGCAGCTGTGAAAAAGTTTTCAGGGAACTTCACTATCCTGCTATTTCATTATGATGGCCGAACTACTGAATGGGATGAGTTTGAATGGTCAAAGCGGGCTATTCATGTGAGTGCTCGCAAACAGACCAAATGGTGGTATGCCAAGCGGTTTCTGCATCCTGACATTGTGGCACCATATGACTATATATTCATATGGGATGAAGACCTGGGTGTTGAGCATTTTAATGCGGAAGAGTACATAAAACTGGTGAGGAAGCATGGCTTGGAGATTTCACAGCCTGGCTTGGAGCCTAATAGAGGGTTGACATGGCAAATGACAAAAAGAAGAGGTGATCAGGAAGTTCACAAAGTGACAGAGGAGAAACCGGGATGGTGTTCTGACCCTCATTTGCCTCCCTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTGTTCTCACGAGATGCATGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTACACGGGTGGGGTCTTGATTTTGCTCTTAGAAGATGTGTTGAGCCGGCACATGAGAAGATTGGAGTTGTTGATTCTCAGTGGATTGTTCACCAAGGTCTTCCCTCACTAGGGAATCAGGGTGAATCTCAAACAGGGAAAGCACCATGGCACGGGGTGAGGGAGAGGTGTAGAAAGGAGTGGACCATGTTCCAGAGTCGGTTGGCAAATGCGGAAAACGCGTATTTCAAGTCCATGAGAATTGATACATCTAATTCCACTGCTCATTAG 1200 0.435 MGIITRSSAGRKPSEIMRFFVTTFIGIVFGFFIGVSVPTLSITKLNLPSGLLPSIDLSYIEDRYTGRQAWSFINNGNKRSSSQVQLSNDTSKIWVPSNPRGAERLPPGIVEAESDFYLRRLWGKPSEDLTSKPNYLVTFTVGYDQKNNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEPNRGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIVHQGLPSLGNQGESQTGKAPWHGVRERCRKEWTMFQSRLANAENAYFKSMRIDTSNSTAH 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00390 399 PANTHER OS06G0731900 PROTEIN 12 397 IPR007877 -
Pumo1g00390 399 Pfam Protein of unknown function (DUF707) 97 383 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00390 Pumo-Chr1 5594432 5599625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00390 - - gmx:100778486 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00860 6 10730812 10736450 Pumo1g00390 1 5594432 5599625 PCT