Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00382 ATGGGACTTGTTTTTACCAAATGGGCATGTGCATTCTTACTATGCTGTTGTCTCATCACTTCTGGGGTATATTCAGGTAAGGTGAACTCTGTTTACTTCACAGTTTCATGCCTTATCCGTTATTTACTCTTCAAAGGCAATGTATTGAGTACATTATCTTACTTGCCTTTCCTCGTTCTAGTGGAGGGGTTACATGGAGGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGGTGGCTGGTGATCGAAGGTTGGATCAAGCCTTCACTGTTTGATGGCATTGCCAATAGAGACATGCTTGATGGGACAGAAGTGCAATTTAAGTCGGTGACGTTGCAGAAGTATGTATCTGCTGAGAATGGGGGAGGAATGAATGTGACAGTTGACAGGGATGTCCCATCTTCATGGGAAACCTTCAGGTTATGGAGAGTATCTGAATCAGAATTTCAATTTCGTACCTCCGAAGGCCAATTTCTTACATGTGATGGTGGAGGTTGCACTGTCTCTGCAACAGCGAAATCTCCTTCAACATCAGAGACATATGGAATTGAGCGGAATGGAAAAAATAGGATTCACCTCAAGATAAAGGGTGGGGCATATCTTCAGGCTACAACCGATGGTCAGCTTACAGCGAACTACCCAGGTGCACCAGGATGGGATGATAATGCTGCCACGTTTGAAATGACAATTGTATCTAATACCTTGCATGGAGATTACCAGCTAGCAAATGGATATGGGCACAGTCGGGCAAAAGATATTCTTAGGAGACATAGAAATAGCTTTATCACCATAGAGGATTTCAAATTTCTATATAAACATGGAATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTATGATCCTGATCCTCCGAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATAATTGATCTTCATGCTGCTCCTAGTTCCCAAAATGGGATGGAGCATAGTGCAAGCAGAGATGGGTTTACGGGCTGGCCAACTTCTCCAGATTACATTTCCGAGTCATTACATGTTATTGAATTTTTAGTTTCTAGATATGCAAGACATCCTGCTTTGCTGGGAATTGAGCTATTGAATGAACCATCTGCCGCCACAGTTTCATTAGATGTTTTAGTTTCATATTACAAGCAGGGCTACCAAATTGTTCGAAAATACTCATCATCAGCTTATGTGATAATCTGCCAGAGGATTGGTGTTGCGGATCCTATGGAACTTTATCAAGCCAACATAGGATCTCACAACTTAGTTTTGGATTTGCATTTCTACAATCTCTTTGACAGATTTTTCGATAATATGAGTGCTATGGATAATATTCAATACATATACAAAAGCCGGGAAGGTCAACTGCAGGCCTTAAACAATTCAAATGGTCCACTTGTTTTAGTTGGTCAGACAGACATCTATTCTTACTGTTTGTTTGACACTGCATTAAATGTTTCACAGTTATAA 1503 0.4065 MGLVFTKWACAFLLCCCLITSGVYSGKVNSVYFTVSCLIRYLLFKGNVLSTLSYLPFLVLVEGLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANRDMLDGTEVQFKSVTLQKYVSAENGGGMNVTVDRDVPSSWETFRLWRVSESEFQFRTSEGQFLTCDGGGCTVSATAKSPSTSETYGIERNGKNRIHLKIKGGAYLQATTDGQLTANYPGAPGWDDNAATFEMTIVSNTLHGDYQLANGYGHSRAKDILRRHRNSFITIEDFKFLYKHGINTVRIPVGWWIAYDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPSSQNGMEHSASRDGFTGWPTSPDYISESLHVIEFLVSRYARHPALLGIELLNEPSAATVSLDVLVSYYKQGYQIVRKYSSSAYVIICQRIGVADPMELYQANIGSHNLVLDLHFYNLFDRFFDNMSAMDNIQYIYKSREGQLQALNNSNGPLVLVGQTDIYSYCLFDTALNVSQL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00382 500 ProSitePatterns Glycosyl hydrolases family 5 signature. 371 380 IPR018087 GO:0004553|GO:0005975
Pumo1g00382 500 SUPERFAMILY Actin-crosslinking proteins 104 226 IPR008999 -
Pumo1g00382 500 Pfam Cellulase (glycosyl hydrolase family 5) 261 449 IPR001547 GO:0004553|GO:0071704
Pumo1g00382 500 SUPERFAMILY (Trans)glycosidases 69 477 IPR017853 -
Pumo1g00382 500 Gene3D - 82 223 - -
Pumo1g00382 500 PANTHER FASCIN 68 482 IPR010431 GO:0007015|GO:0051015
Pumo1g00382 500 Gene3D Glycosidases 224 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00382 Pumo-Chr1 5536844 5541132 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00382 - - gmx:100809472 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00382 1 5536844 5541132 Pumo1g00382 1 5536844 5541132 ECH