LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo1g00372	ATGACATCTTCAGTGGTTGAAGGTGGACGCGACGAGGGGAAACACGAGCCCTCCGATTTGATCACGGAAAACATGAATCTGACGGCTCCAAACCTTTCACTTCCCAGTGAAACATTCTTGAGAGCGGCAATTTCCCTCAAGGACAAGGTGGTGGAGGAGACTTGGAACCGGAGAGATCAAGTGGTTGATCCGACGGTGTATACGGGTCTATTGGGCACCGCCTTCACTTGCTTGCGGTCGTACCAGGTAACCGGTTGCCGGAACGACTTGCTACTATGCAGAGATATCATTGACACGTGTGTCACCGCTGCACGTGCCTCCCTCAGACACGTGACTTTTTTGTGCGGTAGAGGAGGCGTTTATGCGCTTGGTGCTGTCGTTGCCAATTACATGGGGGACCTTCGAAAGCGCGACCTGTTTTTGGGTCTATTCATTGAGGTGGCAAAAGAGAGAGCCCTACCAGTTGGACCAGAGGAAGGTGGTTTTGGAATGTCATATGATATTCTGTATGGACGAGCTGGATTCTTATGGGGTGCATTATTCGTGAACAAGCACCTAGGAGAAGATGCAGTGCCCAAAGACATTCTGGTGCCTATTATTGATGCGGTGTTGGCTGGGGGTAGAGCAGGAGCATCTGATATTAAAGACTGTCCATTGATGTATAGATGGCATGGAACTAGGTACTTGGGTGCAGCAAATGGCCTTGCTGGTATCCTTCATGTGCTGCTACATTTCCCACTTCCTAGTGAGGATGCTGAGGATGTCAAGGGAACTTTGAGGTACCTCATGAGTAAGCGTTTCCCTCACAGTGGAAACTACCCCTCCAGCGAAGGGAATCCAAGGGATAAGTTAGTGCAATGGGGTCATGGCGCAACTGGCATGGCCATCACATTGGCCAAAGCAGCAGAGGTGTTTCCTAATGACAGAGAACTACGAGATGCTGCAATAGAAGCAGGGGAAGTTGTATGGAAGAGTGGATTGGTAAAGAAGGTGGGTCTTGCTGATGGGGTATCTGGAAATGCCTATGCCTTCCTTTCCCTCAACAGGCTCACTAAAGAGAGTATATACGAAGAGAGAGCAAAATCATTCGCTTCCTTCTTGTATGATAATGCAAAATCTCTGGCTGCTGACAATGGCTATTCACTTTTCCAAGGACTTGCTGGGACAGCATGCCTCTGGTTTGATCTGCTTGCACCCGACAATTCAAGGTTCCCAGGCTATGAATTATAG	1230	0.4902	MTSSVVEGGRDEGKHEPSDLITENMNLTAPNLSLPSETFLRAAISLKDKVVEETWNRRDQVVDPTVYTGLLGTAFTCLRSYQVTGCRNDLLLCRDIIDTCVTAARASLRHVTFLCGRGGVYALGAVVANYMGDLRKRDLFLGLFIEVAKERALPVGPEEGGFGMSYDILYGRAGFLWGALFVNKHLGEDAVPKDILVPIIDAVLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPSEDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLAKAAEVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVSGNAYAFLSLNRLTKESIYEERAKSFASFLYDNAKSLAADNGYSLFQGLAGTACLWFDLLAPDNSRFPGYEL	409

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo1g00372	409	PRINTS	Eukaryotic LanC-like protein family signature	196	211	IPR020464	-
	Pumo1g00372	409	PRINTS	Eukaryotic LanC-like protein family signature	302	323	IPR020464	-
	Pumo1g00372	409	PRINTS	Eukaryotic LanC-like protein family signature	347	365	IPR020464	-
	Pumo1g00372	409	PRINTS	Eukaryotic LanC-like protein family signature	395	409	IPR020464	-
	Pumo1g00372	409	PRINTS	Eukaryotic LanC-like protein family signature	264	279	IPR020464	-
	Pumo1g00372	409	SMART	LANC_like_2	60	409	IPR007822	GO:0031179
	Pumo1g00372	409	MobiDBLite	consensus disorder prediction	1	20	-	-
	Pumo1g00372	409	Pfam	Lanthionine synthetase C-like protein	61	409	IPR007822	GO:0031179
	Pumo1g00372	409	CDD	euk_LANCL	66	405	-	-
	Pumo1g00372	409	SUPERFAMILY	LanC-like	53	409	-	-
	Pumo1g00372	409	PRINTS	LanC-like protein superfamily signature	331	344	IPR007822	GO:0031179
	Pumo1g00372	409	PRINTS	LanC-like protein superfamily signature	284	304	IPR007822	GO:0031179
	Pumo1g00372	409	PRINTS	LanC-like protein superfamily signature	379	396	IPR007822	GO:0031179
	Pumo1g00372	409	PRINTS	LanC-like protein superfamily signature	228	244	IPR007822	GO:0031179
	Pumo1g00372	409	PRINTS	LanC-like protein superfamily signature	166	181	IPR007822	GO:0031179
	Pumo1g00372	409	PRINTS	LanC-like protein superfamily signature	63	81	IPR007822	GO:0031179
	Pumo1g00372	409	Gene3D	-	16	409	IPR012341	GO:0005975
	Pumo1g00372	409	PANTHER	LANC-LIKE PROTEIN	35	409	-	-
	Pumo1g00372	409	FunFam	LanC-like protein 2	21	409	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo1g00372	Pumo-Chr1	5426173	5431809	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo1g00372	-		-	gmx:100785406	792.727

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo1g00372	1	5426173	5431809	Pumo1g00372	1	5426173	5431809	ECH