Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00354 ATGGGAAAAAGGCAATCTTTGCGCAACAAAGCCACCCACTTTGTATCCGTCCTTCTCAACCCCATCTCCGATTCCGACACTCCCAATCCCAAAACCTCCAAACAATCCCCACCGTCACCGATACCGACACCAACACCTACACCTCCTTCCGGAGAAGTAGGTGGATCAGAGACAAATGATATTGATGAAGAGGGTAACCGTGGTTTAGTTGATGGGCCTGATACTTCATCCTTCACTGCGTTCCTCTATTCTCTATTGTCTTCTTCTGACACTGCAGATAATGCAAACTCACGCGTGCAGAGTGATGATAATAAACCTGCTGCACCTGATAACAACCCTTTACCAGACTCATCCTCGCTGAAGGAAAATGGTGGGAGGAAAAATTTGTTTTCTAGAAGCAAGCAATCGCTTGGTAGGGCCATTCGCAGAATGGGTGGATTTCGCCATCAAGATCGCAGGGATAATGTTGAAATGAAATTGGATGATGGGAATGGTTCTAAGGTTTCTGGTGGTGTTGAGATGAGGCGTATTGAGCCGGTGGAAGAGTCTGTGACTGTGCCTTTGGTTGATCTTCCAGAAATTTCTGAACCTTCGGTTCTCCTTTCAGACAGTATAAGGAATGTTCTCTATGTTTCTCTTCCACCTCTTATTCACGGAAGGAAATGGCTCTTGCTATACAGCACTTGGAGGCATGGTATATCACTTTCTACTCTTTACCGAAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTTCGAGATAAAAAAGGAGCAGTATTTGGCAGCTTGGTTGAAGCACCTCTCAGGTCATCCAGCAAGAAAAAATACCAGGGAACAAACAATACATTTGTTTTCACAAATATCTCTGGTCATCCTGTTATATATCGTCCAACAGGAGTAAACCGCTTTTTCACACTTTGCAACACTGACTACTTAGCAATTGGTGGAGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGTTCAAGTTCAGTCTCAGAGACTTATGGGAATCCTTGCCTTGCAAATTCTCAAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTATATGCTTCAAAATATGAGGAAGTACTCGCAATGAGCAGAACTGAAGCACCTGGGATCTGCCGATGGTAA 1155 0.4416 MGKRQSLRNKATHFVSVLLNPISDSDTPNPKTSKQSPPSPIPTPTPTPPSGEVGGSETNDIDEEGNRGLVDGPDTSSFTAFLYSLLSSSDTADNANSRVQSDDNKPAAPDNNPLPDSSSLKENGGRKNLFSRSKQSLGRAIRRMGGFRHQDRRDNVEMKLDDGNGSKVSGGVEMRRIEPVEESVTVPLVDLPEISEPSVLLSDSIRNVLYVSLPPLIHGRKWLLLYSTWRHGISLSTLYRRSMLWPGLSLLVVRDKKGAVFGSLVEAPLRSSSKKKYQGTNNTFVFTNISGHPVIYRPTGVNRFFTLCNTDYLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVYASKYEEVLAMSRTEAPGICRW 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00354 384 MobiDBLite consensus disorder prediction 1 74 - -
Pumo1g00354 384 Pfam TLD 224 361 IPR006571 -
Pumo1g00354 384 MobiDBLite consensus disorder prediction 33 49 - -
Pumo1g00354 384 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 33 363 - -
Pumo1g00354 384 MobiDBLite consensus disorder prediction 92 135 - -
Pumo1g00354 384 ProSiteProfiles TLDc domain profile. 199 362 IPR006571 -
Pumo1g00354 384 SMART 109ultra 198 362 IPR006571 -
Pumo1g00354 384 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00354 Pumo-Chr1 5233128 5236890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00354 221 369 EF-hand Containing Proteins AT5G06260 30.189 3.22e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00354 - - gmx:100804124 665.611