Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00348 ATGGGAGGCAATTCACCTGAGAGGAAACCTGGTTGTGGCTTGATAACAGCAGTATTCGGGCGACATAATCCATGGTCACGCAAAACAGTCTCTGCAGGTTCTTCTCCTGTAGCTTACAATTTTGAAAAATCATCAAATTTTCAATATTCAAAACGAGGTCACAGAGACTCTAATGATGTTTTTTCAATTAGAGAATCTGGATATAATGATGTTACAAACTACTCATCTTGTTCTGTCTCCAATCCTCAAAAGCCAACCCATGTTATAAGCCAAAGGAAACCACAAAATAGCAATGAAACAATGGGAAAAGGCCCCTCACCTACTCAAGGTTATGTCAACCAAGGAAAAAGGGTACCAAAAGAAGCTATTGGCATCTCTGGTGAACTTGAAAGCATGATCAACGATCACCTAAAGTCCAAGGGAAGTAGTACCCTTGTTCGAGCTTCTTCCAGTAATGTGATGTTGTTTGGTAATTTAGGTAACCTTAGGCAAGGAGGAGCTGGACCAAATCACAACGCTTACAGTGAAATGGATTACCATGTTAGTAATGTTGCTAGTGGAGGATACACAAATCAAACCATAGGATGTGAATATGACAATAGTAGCTATAGCAAAGAAGCTAAACCAAACAAGGAACAATCAGGTTCACTATGTAGGGCTTTGTCTACTAGAATGGATCCCGAACAATTGAAGATAATGGGCAATGAGGATTACAAGAATGGAAGGTTTGCAGAGGCCTTGGCTTTATATGATGCTGCCATCGCAATTGACTCCAATAAGGCTTCTTATAGGAGCAATAAAAGTGCTGCATTAACGGCTCTTGGTAGGCTTTTCGAGGCTGTTTTTGAATGTAGAGAAGCTATTCGAATTGAGTCTCATTACCAAAGAGCCCATTATCGTTTGGGAAATTTGCACTTTAGATTAGGAGAAACAGATAAAGCTTTGTATCATTATAAACAAGCAGGACCAGAAGTTGATCCAAATGAGATTGCTAAAGTAAAGACTCTCCAAGTATATCTAAACAAATGCACCGAGGCTCGTAGGTTGGGCGATTGGAACACACTTATAATTGAAACCAGCAGTGTTATATCATCTGGTGCAGACTTTGCTCCACAAATATATGCATTACAAGCCGAAGCCTTGTTAAAGCTCCATAGACATCAAGAGGCAGACAAAGTAATGTTAAAGTGCCCTAAATTTGATGTTGATGAATGTACTAAGTTCTTTGGACCTATTGGTAGTGCAAATTTGTTGGTGACACGTGCTCAAGTTGATTTAATTGCTGGCAGATTTGAAGAAGCTTTAGAGGCAGCACAAAAAGCAACTAGGTTGGATTCTAACAGTAGGGAGGCAAATAAGGTGATGAGAAAGGCTCGAGCTGTCACAATTGCTCGTGCAAAGGGAAATGAGCTTTTCAAGGCATCAAAATATTATGAGGCTTGCATTGCTTATGGAGAAGGCCTTGATCATGATCTATATAACTCCGTTTTACTATGCAACAGAGCTGCTTGTAGAGCAAAACTAGGCCAGTTTGAGAAAGCAATGGATGATTGTACTATTGCCCTTAACTTACGCCCATCTTACAGTAAGGCCAGGTTGAGAAGGGCAGATTGTAATGCTAAGTTGGAAAGATGGGAAGCTTCAATACTAGATTATGAAATTTTGCTAAAAGAGACACCAAAAGATGAGGAAGTAAAGCGAGCATTGTTGGAGGCCGAAGCACAACTTAAGAAACAAGGGAGGTGA 1746 0.4015 MGGNSPERKPGCGLITAVFGRHNPWSRKTVSAGSSPVAYNFEKSSNFQYSKRGHRDSNDVFSIRESGYNDVTNYSSCSVSNPQKPTHVISQRKPQNSNETMGKGPSPTQGYVNQGKRVPKEAIGISGELESMINDHLKSKGSSTLVRASSSNVMLFGNLGNLRQGGAGPNHNAYSEMDYHVSNVASGGYTNQTIGCEYDNSSYSKEAKPNKEQSGSLCRALSTRMDPEQLKIMGNEDYKNGRFAEALALYDAAIAIDSNKASYRSNKSAALTALGRLFEAVFECREAIRIESHYQRAHYRLGNLHFRLGETDKALYHYKQAGPEVDPNEIAKVKTLQVYLNKCTEARRLGDWNTLIIETSSVISSGADFAPQIYALQAEALLKLHRHQEADKVMLKCPKFDVDECTKFFGPIGSANLLVTRAQVDLIAGRFEEALEAAQKATRLDSNSREANKVMRKARAVTIARAKGNELFKASKYYEACIAYGEGLDHDLYNSVLLCNRAACRAKLGQFEKAMDDCTIALNLRPSYSKARLRRADCNAKLERWEASILDYEILLKETPKDEEVKRALLEAEAQLKKQGR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00348 581 MobiDBLite consensus disorder prediction 77 114 - -
Pumo1g00348 581 Pfam Tetratricopeptide repeat 297 322 IPR019734 GO:0005515
Pumo1g00348 581 SUPERFAMILY TPR-like 463 573 IPR011990 GO:0005515
Pumo1g00348 581 MobiDBLite consensus disorder prediction 77 113 - -
Pumo1g00348 581 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 11 579 IPR044534 -
Pumo1g00348 581 ProSiteProfiles TPR repeat profile. 415 448 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 227 260 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 495 528 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 295 329 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 461 494 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 529 562 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 415 448 IPR019734 GO:0005515
Pumo1g00348 581 SMART tpr_5 261 294 IPR019734 GO:0005515
Pumo1g00348 581 SUPERFAMILY TPR-like 227 450 IPR011990 GO:0005515
Pumo1g00348 581 Gene3D Tetratricopeptide repeat domain 225 581 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00348 Pumo-Chr1 5155662 5157979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00348 - - gmx:100811282 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00348 1 5155662 5157979 Pumo1g00348 1 5155662 5157979 ECH