Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00347 ATGGCAACCCAAACGAGTCTCCTCTTTCTCTTCCTTTTTCTGCTCTCCCTATGCTTCTTCGGAACAGTTAAATCGGAGGAGGATTGTGTTTACACGCTGTACGTTCGGACGGGTTCGATCATCAAGGGAGGAACCGATTCAATAATTGGGCTCAAGCTATACGACAAGTACGGCTACGGCATATACATCACGAACCTCGAGGCATGGGGCGGGTTAATGGATCCGGGTTACAACTACTTCGAGCGGGGCAACCTCGACATATTCAGCGGCAGAGGCCCTTGCCTGAATGGACCCGTTTGCGCTGCCAACCTAACTTCTGACGGGTCGGGGCCCCATCACGGATGGTACGTTAATTACGTGGAGGTTTCCACCACTGGGGTCCACACACCTTGTTCTCAGCAGCAGTTCACCATTGAGCAGTGGCTCGCCACGGACACCTCGCCTTATGAGCTCTGGGCTGTCAGGAACTACTGTCCAAATAACTTGGGCCAGGGTCAGGCCCTTCCTAAAGCCCATACCACCGATGTGGTCAAATCTCGGTCTGGTTTCTCTATTCTGGAATCCACCGTCCGCGTGTAG 579 0.5337 MATQTSLLFLFLFLLSLCFFGTVKSEEDCVYTLYVRTGSIIKGGTDSIIGLKLYDKYGYGIYITNLEAWGGLMDPGYNYFERGNLDIFSGRGPCLNGPVCAANLTSDGSGPHHGWYVNYVEVSTTGVHTPCSQQQFTIEQWLATDTSPYELWAVRNYCPNNLGQGQALPKAHTTDVVKSRSGFSILESTVRV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00347 192 CDD PLAT_plant_stress 29 156 - -
Pumo1g00347 192 Pfam PLAT/LH2 domain 31 149 IPR001024 GO:0005515
Pumo1g00347 192 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 30 147 IPR036392 GO:0005515
Pumo1g00347 192 ProSiteProfiles PLAT domain profile. 29 156 IPR001024 GO:0005515
Pumo1g00347 192 Gene3D PLAT/LH2 domain 21 148 - -
Pumo1g00347 192 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 8 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00347 Pumo-Chr1 5152470 5153602 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00347 - - gmx:100793024 308.916