Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00340 ATGTTCATCGAGAACTTTAAGGTTGAGAGTCCTAACGTGAAATACACAGAGACTGAGATTCAGTCCGTGTACAACTACGAAACCACCGAACTTGTTCACGAGAACAGGAATGGCACCTATCAGTGGATTGTCAAACCCAAATCCGTCAAATATGAATTTAAAACCAACACCCATGTCCCTAAATTGGGGGTAATGCTTGTGGGGTGGGGTGGAAACAACGGCTCAACCCTCACCGGTGGTGTTATTGCTAACAGAGAGGGCATTTCATGGGCAACAAAGGACAATATTCAACAAGCCAATTACTTTGGCTCCCTCACCCAAGCCTCAGCTATCCGAGTTGGGTCCTTCCAGGGAGAGGAAATCTATGCTCCATTCAAGAGCCTGCTTCCAATGGTTAACCCTGACGACATTGTGTTTGGGGGATGGGATATCAGCAACATGAACCTGGCTGATGCCATGGCCAGGGCAAAGGTGTTTGACATCGATTTGCAGAAGCAGTTGAGGCCTTACATGGAATCCATGGTTCCACTCCCTGGAATCTATGACCCGGATTTCATTGCTGCCAACCAAGAAGAGCGTGCCAACAACGTGATCAAGGGCACAAAGAAAGAGCAAGTTCAACAAATCATCAAAGACATTAAGGCGTTTAAGGAAGCCACCAAAGTGGACAAGGTGGTTGTCCTGTGGACTGCTAACACAGAGAGGTATAGTAATTTGGTTGTGGGACTTAATGACACCATGGAGAACCTCTTGGCTGCCGTTGACAGAAATGAGGCTGAGATTTCTCCTTCCACCTTGTATGCCATTGCTTGTGTTATGGAAAATGTTCCTTTCATTAATGGAAGCCCTCAGAACACTTTTGTCCCAGGGCTGATTGATCTTGCCATCGCGAGGAACACTTTGATTGGTGGAGATGACTTCAAGAGTGGTCAGACCAAAATGAAATCTGTGCTGGTTGATTTCCTTGTGGGGGCTGGTATAAAGCCAACATCAATAGTTAGTTACAACCATCTGGGAAACAATGATGGTATGAATCTCTCGGCTCCACAAACCTTCCGTTCCAAGGAAATCTCCAAGAGCAACGTTGTTGATGATATGGTCAACAGCAATGCCATCCTCTATGAGCCTGGTGAACATCCAGACCATGTTGTTGTTATTAAGTATGTGCCTTACGTAGGGGACAGCAAGAGAGCCATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAACACCATTGTTTTGCACAACACATGTGAGGATTCCCTCTTAGCTGCTCCTATTATCTTGGACTTGGTCCTTCTTGCTGAGCTTAGCACTCGAATCCAGTTCAAAGCTGAAAATGAGGGAAAATTCCACTCATTCCACCCAGTTGCTACCATCCTCAGTTATCTGACCAAGGCTCCTCTGGTTCCACCGGGTACACCAGTGGTGAATGCATTGTCAAAGCAGCGGGCAATGCTGGAGAACATCATGAGAGCTTGTGTTGGATTGGCCCCAGAGAATAACATGATTCTCGAGTACAAGTGA 1533 0.4625 MFIENFKVESPNVKYTETEIQSVYNYETTELVHENRNGTYQWIVKPKSVKYEFKTNTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDNIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQEERANNVIKGTKKEQVQQIIKDIKAFKEATKVDKVVVLWTANTERYSNLVVGLNDTMENLLAAVDRNEAEISPSTLYAIACVMENVPFINGSPQNTFVPGLIDLAIARNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAENEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMILEYK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00340 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Pumo1g00340 510 Gene3D - 1 356 - -
Pumo1g00340 510 Gene3D - 381 510 - -
Pumo1g00340 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Pumo1g00340 510 FunFam Inositol 1-phosphate synthase 314 419 - -
Pumo1g00340 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Pumo1g00340 510 FunFam Inositol-3-phosphate synthase 1 1 356 - -
Pumo1g00340 510 FunFam inositol-3-phosphate synthase 382 510 - -
Pumo1g00340 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Pumo1g00340 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Pumo1g00340 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00340 Pumo-Chr1 5015423 5018006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00340 K01858 - gmx:106797152 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00791 6 9678150 9682223 Pumo1g00340 1 5015423 5018006 PCT