Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00339 ATGTTGCTTGGAAAACGCCCTCGGCCACCGATTATGAAGAGAACTACGAGCATGAGTGGTGGTTTGGCCGTGGAAACGCAAACAACCAACGAGGAAGTAGTGATGTCTGATCATGAGCCTAACATCAAAGACGTCGATCCACATGTTGTTGCCATGGGAGGAACACCAAATGAATTGGTTTCTCAGGCCAACGGATCATATGTATATGGTGACCCTTTGATGGGCATGCCCCTTTCCCCCACAACCTCAAATAATCATCGTCACACTCACAACCATACAACAAACACTAACATACACACTTCTCACTTTCTTCGGACTTGTGGCCTCTGCAACTCTCGTTTGGCACCTGGTCGAGACATCTATATGTATAGGGGGGATACGGCATTTTGCAGTTTGGAGTGTAGGGAGAAGCAGATGAAGCAAGACCAGAGAAAAGAAAAGTGGAAGGCCGGGTCTAACAGGGAACACCGTGCATCGCCAACCGGCGCCACCGCGAAGGCTTCCGCTAAAAGCGAAACGGCTGCTTGTAATTGA 534 0.4906 MLLGKRPRPPIMKRTTSMSGGLAVETQTTNEEVVMSDHEPNIKDVDPHVVAMGGTPNELVSQANGSYVYGDPLMGMPLSPTTSNNHRHTHNHTTNTNIHTSHFLRTCGLCNSRLAPGRDIYMYRGDTAFCSLECREKQMKQDQRKEKWKAGSNREHRASPTGATAKASAKSETAACN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00339 177 ProSiteProfiles Zinc finger FLZ-type profile. 102 146 IPR007650 -
Pumo1g00339 177 MobiDBLite consensus disorder prediction 140 154 - -
Pumo1g00339 177 PANTHER FCS-LIKE ZINC FINGER 5 1 169 - -
Pumo1g00339 177 MobiDBLite consensus disorder prediction 1 22 - -
Pumo1g00339 177 Pfam zinc-finger of the FCS-type, C2-C2 97 145 IPR007650 -
Pumo1g00339 177 MobiDBLite consensus disorder prediction 140 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00339 Pumo-Chr1 5000936 5002718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00339 - - gmx:100500658 223.016